Detailed information NTG1044818

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACEO96_RS03195
• Genome accession: NZ_CP168657
• Coordinates: 664036..667428 (-)
• Length: 1130 a.a.
• NCBI ID: WP_026028236.1
• Uniprot ID: A0A233HLW7
• Organism: Vibrio anguillarum strain VA1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 659036..672428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEO96_RS03180 (ACEO96_03180)	-	659440..660465 (-)	1026	WP_013857641.1	ABC transporter permease	-
ACEO96_RS03185 (ACEO96_03185)	-	660468..661454 (-)	987	WP_013857640.1	ABC transporter permease	-
ACEO96_RS03190 (ACEO96_03190)	-	661621..663291 (-)	1671	WP_013857639.1	ABC transporter substrate-binding protein	-
ACEO96_RS03195 (ACEO96_03195)	chiS	664036..667428 (-)	3393	WP_026028236.1	response regulator	Regulator
ACEO96_RS03200 (ACEO96_03200)	rsmC	667628..668671 (-)	1044	WP_017049773.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACEO96_RS03205 (ACEO96_03205)	-	668755..669840 (-)	1086	WP_017049774.1	AI-2E family transporter	-
ACEO96_RS03210 (ACEO96_03210)	hemL	670118..671413 (-)	1296	WP_170899459.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACEO96_RS03215 (ACEO96_03215)	erpA	671736..672077 (+)	342	WP_026027518.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127823.51 Da
• Isoelectric Point: 6.2690

>NTDB_id=1044818 ACEO96_RS03195 WP_026028236.1 664036..667428(-) (chiS) [Vibrio anguillarum strain VA1]
MFRFSRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHTKDLQEQSTSHLLSVRDTKQQQVLDYLTAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGLDIDQAREHAQQRYIPGSGDQIKTSILPQSSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGDVVYSVYKHDNYGTNLLTGKYKDSNLGKTFRQLEQQVGEQRKINEEYTPVIISDFSQQEGQSVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLVADTNATSQIRTLLVGQDHHSRILSYTQQEIETSQKVINLALSGLSAVGTYTNTLNEK
TIAAYAPVANKNINWALVVEIPEKEAYARVHQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
NVINTDRKDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQLIRKQNDELHLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGSSGTITADHRYQLGIIISSGQRLTNLVDDLLDYHKMRYGSLDIKQCAVDLSGATRLVLELSNHLLNKKPIRV
INQIPDECIWVSADPQRLEQVLYNLVGNAIKYTTEGKIVISANVVDDKIRVQVVDTGQGIPAEQLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMQGTLYVSSQPMVGTTFSFTLPLASKAEIESTSYMEAGHFQSPTISDIELPEMHSLPENKE
GPVLLIADDEPVNLRVLDSFLRLEGYQVRTAKDGNEVISAVEKEKPELLLLDIMMPGLSGYQVCEKLRETYDHAELPIIM
LTALNQTDDRVRGFAAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENNQLQQELKHRAMVEASLLETQGRLLEQLE
SAPEAIICIRDDHKIRFANEAAARLFKRSQEQLKRSNAEELIAPKYLVVEQEHYCGNIDIYVEDTRQHMSADVLRLPDGS
GLQAMYIFNVGGNINAARINNLETAIEALSSYAFEGDKEKLQQLKELGGEFTRIADKVSGESQSKQDLMREVLVEAMTSA
LDYWERVSNQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEHGPERSHIEAQRD
KLQKLLTSSL

Nucleotide

• Length: 3393 bp

>NTDB_id=1044818 ACEO96_RS03195 WP_026028236.1 664036..667428(-) (chiS) [Vibrio anguillarum strain VA1]
ATGTTTAGGTTCTCTCGTAAGCAAAAATTTAAGCGCCTGCAAAATACTCTTATGCTGGCTTTTCTCGTTTTGAGCATCAC
GCCTTTAACTGTGACTGCCATTTTTTTTCTGCAATCACACACTAAAGATCTTCAAGAACAAAGCACGTCTCACTTATTGT
CAGTCAGAGACACTAAGCAACAGCAAGTTCTCGATTACCTCACGGCCAAAGAATCAGAAGTGATGGGGTTTGTCCGTTCA
GAGTTAGCTTATGCTAGTGGAGGGCGCTTTTACGGCTTAGTCAATGCGTTCCAAAGACTTGGTCTGGATATTGATCAAGC
TCGTGAGCATGCCCAGCAGCGTTATATTCCTGGTTCTGGTGATCAGATAAAAACGTCAATATTGCCACAATCGAGCAGCT
ATGTAGGCAGTGAACGGTATCGCTTACTGCACAAACGCTATCATTGGGCGTATTTAGAACTGCTTAAACGTTCTGATTTT
GACGATATTTTACTGGTGGATCTCGATGGTGATGTCGTTTATTCCGTTTATAAGCACGACAACTATGGGACGAATTTACT
GACCGGAAAATACAAAGATAGCAATCTGGGTAAAACATTCCGTCAGTTAGAGCAGCAAGTTGGCGAACAACGAAAAATCA
ATGAAGAATATACACCAGTCATTATTTCTGATTTTTCACAACAAGAAGGGCAATCAGTTGCTTGGCTTGGCGCGCCCATT
ATTCAACAGGGCTACCTGCACAGCTACGCCATGTTCCGCCTACCAAACAATGGCATCACAAAGCTCGTTGCTGACACCAA
TGCGACATCGCAAATAAGAACTTTACTCGTCGGGCAAGATCATCATTCTCGAATACTCTCTTACACGCAGCAAGAAATCG
AGACTAGTCAAAAAGTGATCAATCTTGCGCTTTCTGGATTGAGTGCCGTTGGTACTTACACTAATACATTGAATGAGAAA
ACCATTGCCGCCTATGCACCTGTTGCAAACAAAAACATCAATTGGGCCTTGGTCGTAGAGATACCAGAAAAAGAGGCTTA
TGCGCGAGTTCATCAGCTTGAGAAGTTATTTATTTTCGCCATGCTAACCGCGATTATTTTAGTCGTCATCGCTTCACATT
ATCTCTCTAATTTTATTACCTCTCCCCTACTGAAGCTCACTTGGGCGGCAGAAAAAGTCTCAGCTGGGGATTTAGATGAA
AATGTTATCAATACCGATCGTAAAGATGAGATTGGTCGACTCGCAGTGAGTTTTGAGCGTATGCAGCGTTCAATCCGAGA
AAAAATGCAGCTGATTAAAGCGCAAAATAAAGAGCTCGAAAGCAACATTCAATTAATCCGCAAACAGAACGATGAGTTGC
ATCTCGCTAACAAACTAAAAGATGAATTCCTAGCCACAACGTCACATGAATTAAGAACACCGCTGCACGGTATGGTCGGT
ATTGCAGAAGCACTGATCTCTGGGTCAAGTGGAACTATCACCGCCGATCATCGTTATCAATTGGGCATAATCATCAGCAG
TGGACAACGGCTGACAAACTTGGTCGATGACTTACTCGATTACCATAAAATGCGCTATGGCAGCTTGGATATCAAACAGT
GCGCTGTTGATCTATCCGGCGCAACACGCTTAGTGTTAGAGCTGTCTAACCATCTACTCAACAAAAAGCCCATTCGCGTA
ATAAACCAAATCCCTGATGAATGCATTTGGGTCTCTGCCGATCCACAACGATTAGAGCAAGTGCTTTATAACCTTGTAGG
AAACGCCATTAAATATACGACTGAAGGGAAAATTGTCATTTCAGCCAATGTGGTTGATGACAAGATTCGTGTCCAAGTTG
TCGATACGGGGCAAGGCATTCCTGCTGAACAACTTGAACACATCTTCGAACCACTGATTCAAGCAGGACAAGATGCTAGT
CGTTATCGACAAGGCGCAGGCTTGGGTCTTTCGATCAGCCGTCAATTGATCGAATTAATGCAAGGAACGCTTTATGTCAG
TAGCCAACCGATGGTCGGTACGACATTCAGCTTTACCTTACCATTAGCATCAAAAGCGGAAATTGAATCGACAAGCTATA
TGGAAGCTGGCCATTTCCAATCTCCGACCATTTCAGACATTGAACTGCCTGAAATGCATTCACTACCTGAAAATAAAGAA
GGCCCAGTGCTACTGATAGCAGATGATGAACCCGTCAATCTGCGTGTCCTAGACAGCTTCCTACGTTTAGAAGGCTATCA
AGTCCGCACCGCTAAAGATGGCAATGAAGTCATTAGCGCGGTCGAAAAAGAAAAACCGGAACTTCTACTGCTCGACATTA
TGATGCCAGGATTAAGCGGCTACCAAGTCTGTGAAAAGTTAAGAGAAACATACGATCATGCCGAGCTACCTATCATTATG
TTGACGGCATTAAATCAAACTGACGATAGAGTTCGTGGTTTTGCAGCGGGAGCGAACGATTACTTATCGAAACCTTTTAA
TAAGCAAGAGCTCGCTGCACGTATTACGGCGCATTTAACGGCCAGCAAAGCTGAACAAAGACGTATTGAGAACAACCAAC
TGCAACAAGAGCTGAAGCATAGAGCAATGGTAGAGGCCAGTTTATTGGAAACCCAAGGCCGTCTACTAGAGCAGCTTGAA
TCTGCTCCTGAGGCCATTATTTGCATTCGAGACGATCATAAAATCCGCTTTGCGAACGAAGCGGCTGCTCGGTTATTTAA
GCGCAGCCAAGAACAACTAAAGCGCTCAAATGCGGAAGAACTCATCGCTCCTAAATACTTAGTCGTCGAGCAAGAGCATT
ACTGCGGTAATATCGATATCTATGTCGAAGATACACGTCAACATATGTCTGCTGATGTGTTACGACTACCGGATGGCTCT
GGGCTGCAGGCTATGTACATCTTTAACGTGGGTGGAAACATCAATGCAGCGCGCATCAATAACCTTGAAACCGCTATTGA
AGCACTATCCAGTTACGCATTTGAAGGCGATAAAGAAAAACTGCAGCAGCTCAAAGAACTCGGTGGCGAGTTCACTCGTA
TCGCCGACAAAGTATCGGGAGAGAGTCAATCTAAGCAAGATTTAATGCGCGAAGTACTGGTTGAAGCAATGACCAGTGCT
TTAGATTACTGGGAACGGGTCAGTAACCAAAGCAAGTTTACCTTTGCAGAGCAGAGTGGGCTATGGCGAGTGTATCTCGA
TAGAAGCACATTACAGACTCGGACACTAGACAAGTACTTACGTATCGAGACACTGCCTAAAACACCTCGCTGGCGTACCG
TTCTTAATTCGTTAGATTACATTCTTGATCATTGTCAGGAGCACGGCCCTGAACGCTCTCACATCGAAGCGCAGCGCGAT
AAATTGCAAAAGCTACTGACCTCATCACTCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (725-835)

• PAS fold (PAS) (876-926)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

3D structure

• AlphaFold DB: A0A233HLW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	81.649	99.823	0.815