Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACCB35_RS06160 Genome accession   NZ_CP168654
Coordinates   1242601..1243407 (+) Length   268 a.a.
NCBI ID   WP_374056220.1    Uniprot ID   -
Organism   Rossellomorea sp. FM04394     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1237601..1248407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCB35_RS06130 - 1239356..1239679 (+) 324 WP_374056216.1 hypothetical protein -
  ACCB35_RS06135 - 1239775..1240125 (+) 351 WP_374056217.1 VOC family protein -
  ACCB35_RS06140 - 1240520..1241020 (+) 501 WP_374056218.1 DoxX family protein -
  ACCB35_RS06145 - 1241117..1241302 (-) 186 WP_044339722.1 YfhD family protein -
  ACCB35_RS06150 - 1241408..1241533 (-) 126 WP_082051312.1 YfhE family protein -
  ACCB35_RS06155 - 1241605..1242510 (-) 906 WP_374056219.1 TIGR01777 family oxidoreductase -
  ACCB35_RS06160 recX 1242601..1243407 (+) 807 WP_374056220.1 recombination regulator RecX Regulator
  ACCB35_RS06165 - 1243467..1243880 (+) 414 WP_374056221.1 hypothetical protein -
  ACCB35_RS06170 - 1243924..1244595 (-) 672 WP_374056222.1 SDR family NAD(P)-dependent oxidoreductase -
  ACCB35_RS06175 - 1244993..1245319 (+) 327 WP_374056223.1 YfhH family protein -
  ACCB35_RS06180 - 1245359..1245517 (-) 159 WP_082051311.1 YpzG family protein -
  ACCB35_RS06185 - 1245549..1245713 (-) 165 WP_044339716.1 small, acid-soluble spore protein K -
  ACCB35_RS06190 - 1245865..1246140 (+) 276 WP_034762572.1 YfhJ family protein -
  ACCB35_RS06195 - 1246184..1247170 (-) 987 WP_374056224.1 metal-dependent hydrolase -
  ACCB35_RS06200 - 1247261..1247569 (+) 309 WP_299745063.1 hypothetical protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 31572.88 Da        Isoelectric Point: 5.7649

>NTDB_id=1044759 ACCB35_RS06160 WP_374056220.1 1242601..1243407(+) (recX) [Rossellomorea sp. FM04394]
MGKISKITKQVKNDERYNLFIDGKYAFSVDEAVLAKFQLRKGLEIDELEISELQYEDDVKKAFNKAIQYLAYRMRTEKEI
RDHLQEGDPEDGIIQEVIHKLNDIKYINDLEFAHAFVGTHMNTSDKGPTWIRGELRRKGVDDPYIEEALAVFSVEKQVDK
AVGLTEKLLQKYRKDSKMIARQKIEQNLMRKGYPGSVMKIVWETVESDRDDDEKWDAVYHQGLKAHRKLSSKYDGYEYVQ
KMKQTLYRKGFSMEDIERLLEELKENEE

Nucleotide


Download         Length: 807 bp        

>NTDB_id=1044759 ACCB35_RS06160 WP_374056220.1 1242601..1243407(+) (recX) [Rossellomorea sp. FM04394]
ATGGGTAAGATTTCGAAAATAACGAAGCAAGTGAAGAACGATGAGCGTTACAATTTATTTATAGATGGAAAATATGCCTT
CAGTGTCGATGAAGCAGTCCTGGCGAAGTTTCAGCTCAGAAAAGGATTGGAGATCGATGAGCTTGAGATTTCTGAGCTAC
AATACGAAGACGATGTGAAAAAAGCATTCAATAAAGCCATACAGTATTTAGCCTATCGAATGCGTACGGAAAAAGAGATT
CGGGATCATCTACAAGAAGGGGATCCCGAAGATGGAATCATCCAGGAAGTGATTCATAAATTAAATGATATTAAATACAT
CAATGATTTAGAATTCGCACACGCATTTGTCGGGACTCACATGAATACATCTGATAAGGGTCCTACATGGATCCGTGGGG
AATTAAGAAGAAAAGGGGTGGATGACCCTTATATCGAAGAGGCTCTTGCTGTATTCTCAGTAGAGAAGCAGGTTGACAAA
GCGGTCGGCCTTACCGAAAAACTTCTTCAGAAATACAGAAAAGACTCCAAAATGATCGCCAGGCAAAAGATTGAACAAAA
CCTGATGCGAAAAGGATACCCGGGTTCTGTTATGAAAATCGTCTGGGAAACAGTAGAATCAGATCGCGATGACGATGAAA
AATGGGATGCCGTCTATCATCAAGGATTAAAGGCTCATAGAAAACTGAGTTCTAAATATGATGGATATGAGTACGTCCAA
AAAATGAAACAAACGCTATATCGAAAAGGTTTTTCAATGGAGGACATCGAAAGACTTTTAGAAGAATTAAAAGAAAATGA
AGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(87-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.43

98.134

0.485

Multiple sequence alignment