Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | ACCB35_RS00590 | Genome accession | NZ_CP168654 |
| Coordinates | 114267..115643 (+) | Length | 458 a.a. |
| NCBI ID | WP_374055388.1 | Uniprot ID | - |
| Organism | Rossellomorea sp. FM04394 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 109267..120643
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCB35_RS00575 | - | 109708..110256 (+) | 549 | WP_374056918.1 | UvrB/UvrC motif-containing protein | - |
| ACCB35_RS00580 | - | 110253..111335 (+) | 1083 | WP_374055387.1 | protein arginine kinase | - |
| ACCB35_RS00585 | clpC | 111337..113784 (+) | 2448 | WP_044340500.1 | ATP-dependent protease ATP-binding subunit ClpC | - |
| ACCB35_RS00590 | radA | 114267..115643 (+) | 1377 | WP_374055388.1 | DNA repair protein RadA | Machinery gene |
| ACCB35_RS00595 | disA | 115647..116720 (+) | 1074 | WP_044340502.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ACCB35_RS00600 | - | 116935..118026 (+) | 1092 | WP_374055389.1 | PIN/TRAM domain-containing protein | - |
| ACCB35_RS00605 | ispD | 118101..118805 (+) | 705 | WP_374055390.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ACCB35_RS00610 | ispF | 118798..119274 (+) | 477 | WP_374055391.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 458 a.a. Molecular weight: 49970.44 Da Isoelectric Point: 6.7664
>NTDB_id=1044753 ACCB35_RS00590 WP_374055388.1 114267..115643(+) (radA) [Rossellomorea sp. FM04394]
MAKKKTKFVCSSCGYESAKWMGKCPGCNEWNTMVEEVEMTGKKPRGSFMHSENSGPTKAEKLISIETKQEPRVLTESKEL
NRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSSQLADQKQKVLYISGEESIKQTKLRADRLSIKSDDLYIFAETNLELIH
QTIEQISPDFVIIDSIQTIFHPEVTSAPGSVSQVRECTAELMRIGKTKGIAIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHSYRILRAVKNRFGSTNEMGIFEMKELGLEEVANPSEIFLEERSQGAAGSTVVASMEGTRPVLVEIQALVTPTSF
NNPRRMATGIDHSRVSLIMAVLEKRAGMLLQQQDAYLKVAGGVKLDEPAIDLAVAASIASSFRDKASSAHDCIIGEVGLT
GEIRRVSRIEQRVQEAAKLGFRRVIIPQNNLSGWQPPSDIEVTGVTNINEALAIILGG
MAKKKTKFVCSSCGYESAKWMGKCPGCNEWNTMVEEVEMTGKKPRGSFMHSENSGPTKAEKLISIETKQEPRVLTESKEL
NRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSSQLADQKQKVLYISGEESIKQTKLRADRLSIKSDDLYIFAETNLELIH
QTIEQISPDFVIIDSIQTIFHPEVTSAPGSVSQVRECTAELMRIGKTKGIAIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHSYRILRAVKNRFGSTNEMGIFEMKELGLEEVANPSEIFLEERSQGAAGSTVVASMEGTRPVLVEIQALVTPTSF
NNPRRMATGIDHSRVSLIMAVLEKRAGMLLQQQDAYLKVAGGVKLDEPAIDLAVAASIASSFRDKASSAHDCIIGEVGLT
GEIRRVSRIEQRVQEAAKLGFRRVIIPQNNLSGWQPPSDIEVTGVTNINEALAIILGG
Nucleotide
Download Length: 1377 bp
>NTDB_id=1044753 ACCB35_RS00590 WP_374055388.1 114267..115643(+) (radA) [Rossellomorea sp. FM04394]
TTGGCAAAGAAAAAGACAAAGTTTGTATGTTCATCATGTGGATATGAGTCTGCTAAATGGATGGGGAAATGTCCGGGGTG
TAACGAGTGGAACACGATGGTGGAAGAAGTTGAAATGACGGGGAAAAAGCCTCGGGGATCATTTATGCATTCTGAAAATA
GCGGGCCCACTAAAGCAGAAAAGCTTATCTCAATCGAAACAAAGCAAGAACCAAGAGTATTGACCGAATCGAAAGAGCTG
AATCGGGTGTTAGGTGGAGGGGTAGTCCCGGGTTCACTGGTGTTGATAGGTGGAGATCCCGGGATCGGTAAATCTACTTT
ATTGCTTCAGGTATCTTCCCAGCTGGCCGATCAAAAACAGAAGGTCCTATATATATCCGGAGAAGAATCGATCAAGCAAA
CAAAACTTCGTGCAGATCGATTAAGTATCAAGTCGGATGATTTATATATATTTGCGGAAACGAACCTTGAATTGATTCAT
CAAACGATTGAACAAATCTCACCTGATTTTGTCATCATCGACTCGATTCAAACGATTTTCCATCCAGAAGTGACGTCTGC
TCCCGGCAGTGTTTCCCAAGTAAGGGAATGTACAGCTGAATTAATGAGAATCGGAAAAACAAAAGGCATCGCCATCTTCA
TTGTAGGGCATGTTACAAAGGAAGGGTCGATTGCCGGACCACGTTTATTGGAACATATGGTAGATACCGTGCTGTATTTT
GAAGGGGAGCGCCATCATTCATATCGTATTTTAAGAGCCGTGAAGAATCGCTTCGGTTCCACGAATGAGATGGGGATCTT
TGAAATGAAGGAGCTTGGTTTGGAGGAGGTCGCAAATCCTTCCGAGATATTCCTGGAGGAGCGTTCCCAAGGTGCGGCAG
GCTCAACGGTCGTTGCATCCATGGAAGGTACAAGGCCTGTTCTGGTGGAGATACAAGCCCTTGTCACACCTACAAGCTTC
AATAACCCTCGACGTATGGCAACAGGGATCGATCATAGCCGTGTTTCACTTATTATGGCCGTGTTGGAGAAGCGGGCAGG
AATGCTATTGCAGCAGCAGGATGCTTATTTAAAAGTGGCAGGTGGAGTCAAACTGGATGAACCTGCGATTGATCTGGCTG
TTGCCGCGAGTATTGCGTCCAGCTTCCGGGATAAAGCGTCCAGTGCTCATGATTGTATCATCGGAGAGGTCGGATTGACG
GGTGAAATAAGGAGGGTGTCGAGAATTGAGCAACGTGTCCAAGAAGCGGCTAAACTAGGCTTTAGACGTGTGATTATTCC
CCAAAATAACTTAAGTGGATGGCAGCCGCCTTCGGATATAGAGGTCACAGGAGTAACAAATATAAACGAAGCGCTGGCTA
TTATTTTAGGAGGATAA
TTGGCAAAGAAAAAGACAAAGTTTGTATGTTCATCATGTGGATATGAGTCTGCTAAATGGATGGGGAAATGTCCGGGGTG
TAACGAGTGGAACACGATGGTGGAAGAAGTTGAAATGACGGGGAAAAAGCCTCGGGGATCATTTATGCATTCTGAAAATA
GCGGGCCCACTAAAGCAGAAAAGCTTATCTCAATCGAAACAAAGCAAGAACCAAGAGTATTGACCGAATCGAAAGAGCTG
AATCGGGTGTTAGGTGGAGGGGTAGTCCCGGGTTCACTGGTGTTGATAGGTGGAGATCCCGGGATCGGTAAATCTACTTT
ATTGCTTCAGGTATCTTCCCAGCTGGCCGATCAAAAACAGAAGGTCCTATATATATCCGGAGAAGAATCGATCAAGCAAA
CAAAACTTCGTGCAGATCGATTAAGTATCAAGTCGGATGATTTATATATATTTGCGGAAACGAACCTTGAATTGATTCAT
CAAACGATTGAACAAATCTCACCTGATTTTGTCATCATCGACTCGATTCAAACGATTTTCCATCCAGAAGTGACGTCTGC
TCCCGGCAGTGTTTCCCAAGTAAGGGAATGTACAGCTGAATTAATGAGAATCGGAAAAACAAAAGGCATCGCCATCTTCA
TTGTAGGGCATGTTACAAAGGAAGGGTCGATTGCCGGACCACGTTTATTGGAACATATGGTAGATACCGTGCTGTATTTT
GAAGGGGAGCGCCATCATTCATATCGTATTTTAAGAGCCGTGAAGAATCGCTTCGGTTCCACGAATGAGATGGGGATCTT
TGAAATGAAGGAGCTTGGTTTGGAGGAGGTCGCAAATCCTTCCGAGATATTCCTGGAGGAGCGTTCCCAAGGTGCGGCAG
GCTCAACGGTCGTTGCATCCATGGAAGGTACAAGGCCTGTTCTGGTGGAGATACAAGCCCTTGTCACACCTACAAGCTTC
AATAACCCTCGACGTATGGCAACAGGGATCGATCATAGCCGTGTTTCACTTATTATGGCCGTGTTGGAGAAGCGGGCAGG
AATGCTATTGCAGCAGCAGGATGCTTATTTAAAAGTGGCAGGTGGAGTCAAACTGGATGAACCTGCGATTGATCTGGCTG
TTGCCGCGAGTATTGCGTCCAGCTTCCGGGATAAAGCGTCCAGTGCTCATGATTGTATCATCGGAGAGGTCGGATTGACG
GGTGAAATAAGGAGGGTGTCGAGAATTGAGCAACGTGTCCAAGAAGCGGCTAAACTAGGCTTTAGACGTGTGATTATTCC
CCAAAATAACTTAAGTGGATGGCAGCCGCCTTCGGATATAGAGGTCACAGGAGTAACAAATATAAACGAAGCGCTGGCTA
TTATTTTAGGAGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
73.102 |
100 |
0.736 |
| radA | Streptococcus mitis NCTC 12261 |
64.602 |
98.69 |
0.638 |
| radA | Streptococcus mitis SK321 |
64.602 |
98.69 |
0.638 |
| radA | Streptococcus pneumoniae Rx1 |
64.381 |
98.69 |
0.635 |
| radA | Streptococcus pneumoniae D39 |
64.381 |
98.69 |
0.635 |
| radA | Streptococcus pneumoniae R6 |
64.381 |
98.69 |
0.635 |
| radA | Streptococcus pneumoniae TIGR4 |
64.381 |
98.69 |
0.635 |