Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACEN9J_RS24605 Genome accession   NZ_CP168540
Coordinates   5322420..5322818 (+) Length   132 a.a.
NCBI ID   WP_057590817.1    Uniprot ID   A0A2E9BVN5
Organism   Variovorax sp. Varisp41 strain CT11-41     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5317420..5327818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN9J_RS24585 (ACEN9J_24585) - 5318374..5319774 (+) 1401 WP_413762301.1 amidase family protein -
  ACEN9J_RS24590 (ACEN9J_24590) hemL 5319784..5321070 (-) 1287 WP_413762302.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ACEN9J_RS24595 (ACEN9J_24595) thiD 5321091..5322056 (-) 966 WP_057590816.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ACEN9J_RS24600 (ACEN9J_24600) - 5322168..5322338 (+) 171 WP_007838397.1 rubredoxin -
  ACEN9J_RS24605 (ACEN9J_24605) pilG 5322420..5322818 (+) 399 WP_057590817.1 response regulator Regulator
  ACEN9J_RS24610 (ACEN9J_24610) - 5322819..5323184 (+) 366 WP_057590818.1 response regulator -
  ACEN9J_RS24615 (ACEN9J_24615) - 5323204..5323737 (+) 534 WP_057598084.1 chemotaxis protein CheW -
  ACEN9J_RS24620 (ACEN9J_24620) - 5323784..5326111 (+) 2328 WP_057590820.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14680.84 Da        Isoelectric Point: 7.9041

>NTDB_id=1044526 ACEN9J_RS24605 WP_057590817.1 5322420..5322818(+) (pilG) [Variovorax sp. Varisp41 strain CT11-41]
MGPNGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKVNDHKPHLIFCDILMPRLDGYQTCAIIKRNAHFS
KVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGNVSQEVQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1044526 ACEN9J_RS24605 WP_057590817.1 5322420..5322818(+) (pilG) [Variovorax sp. Varisp41 strain CT11-41]
ATGGGCCCGAATGGATCAGGTTACAAGGTGCTCGTCATCGACGACAGCAACACCATCCGGCGCAGTGCCGAGATTTTTTT
GAAGCAGGGTGGTCACGAGGTTCTCCTCGCCGAAGACGGCTTCGACGCGCTCTCCAAGGTTAACGACCACAAGCCGCACC
TGATTTTCTGCGACATCCTGATGCCGCGGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCCCATTTCTCC
AAGGTCCCGGTCGTGATGCTGTCGTCGAAGGACGGCGTGTTCGACAAGGCGCGCGGCCGCATGGTCGGATCGCAAGACTA
CCTGACCAAGCCTTTCACCAAAGACCAGCTGCTGCAGGCCGTGCAGCAGTTCGGCAACGTTTCACAGGAAGTGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2E9BVN5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

61.404

86.364

0.53

Multiple sequence alignment