Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACEN81_RS13575 Genome accession   NZ_CP168529
Coordinates   2927076..2927696 (+) Length   206 a.a.
NCBI ID   WP_054803149.1    Uniprot ID   A0A807LKA2
Organism   Kosakonia cowanii strain CT11-105     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 2922076..2932696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN81_RS13555 (ACEN81_13560) - 2922466..2924211 (-) 1746 WP_413310756.1 AAA family ATPase -
  ACEN81_RS13560 (ACEN81_13565) matP 2924394..2924846 (+) 453 WP_023481810.1 macrodomain Ter protein MatP -
  ACEN81_RS13565 (ACEN81_13570) ompA 2924933..2925982 (-) 1050 WP_023481315.1 porin OmpA -
  ACEN81_RS13570 (ACEN81_13575) sulA 2926350..2926859 (-) 510 WP_200579318.1 SOS-induced cell division inhibitor SulA -
  ACEN81_RS13575 (ACEN81_13580) sxy/tfoX 2927076..2927696 (+) 621 WP_054803149.1 TfoX/Sxy family DNA transformation protein Regulator
  ACEN81_RS13580 (ACEN81_13585) yccS 2927693..2929819 (-) 2127 WP_200133967.1 YccS family putative transporter -
  ACEN81_RS13585 (ACEN81_13590) - 2929836..2930282 (-) 447 WP_094420311.1 YccF domain-containing protein -
  ACEN81_RS13590 (ACEN81_13595) helD 2930405..2932459 (+) 2055 WP_413310755.1 DNA helicase IV -

Sequence


Protein


Download         Length: 206 a.a.        Molecular weight: 23462.18 Da        Isoelectric Point: 10.2311

>NTDB_id=1044492 ACEN81_RS13575 WP_054803149.1 2927076..2927696(+) (sxy/tfoX) [Kosakonia cowanii strain CT11-105]
MEDLSYQRIYQSREYLTSLGQISHRAHFGGYSLAVDNIVFAMIAEGKLYLRACDESAQYDVVRRAPLLSLNKRGRQISLN
YFYVSDNVWGDRGLLLKLSTLALDAARREKTQREKLFRLRDLPNLSSQLEFQLQQAGIKDAQILRLLGAKVCWLRLRKMN
KQLSVKVLFALEGAIVGIHEAALPASRRQALLEWSNDVINKGANPL

Nucleotide


Download         Length: 621 bp        

>NTDB_id=1044492 ACEN81_RS13575 WP_054803149.1 2927076..2927696(+) (sxy/tfoX) [Kosakonia cowanii strain CT11-105]
ATGGAAGACCTATCTTATCAACGGATATATCAATCGCGCGAATATCTCACTTCACTCGGACAAATTAGCCATCGCGCCCA
CTTTGGTGGTTATAGCCTTGCAGTGGATAACATCGTTTTTGCGATGATAGCCGAGGGGAAACTCTACTTACGCGCCTGTG
ATGAAAGCGCGCAGTATGACGTCGTCCGGCGTGCACCGCTTTTAAGTCTCAACAAGCGGGGGCGTCAGATATCGTTAAAT
TATTTCTATGTCAGCGACAATGTATGGGGTGACCGCGGCTTACTGCTGAAGCTTTCTACACTTGCGCTTGATGCAGCACG
GCGGGAGAAAACACAGCGCGAAAAACTTTTTCGGCTGCGCGATCTACCCAATCTTTCCAGTCAACTCGAGTTTCAATTGC
AGCAGGCCGGCATCAAAGATGCGCAAATCCTGCGGCTACTTGGTGCGAAAGTTTGCTGGCTCAGACTTCGGAAAATGAAT
AAACAACTCAGTGTAAAAGTGTTATTTGCACTGGAAGGGGCCATCGTCGGCATTCATGAAGCAGCGCTTCCGGCAAGTCG
TCGCCAGGCGCTGCTTGAGTGGTCTAATGATGTGATCAATAAAGGAGCTAACCCTCTCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A807LKA2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

52.683

99.515

0.524


Multiple sequence alignment