Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   Q433_RS20835 Genome accession   NZ_CP007409
Coordinates   4028979..4029827 (-) Length   282 a.a.
NCBI ID   WP_015715080.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4023979..4034827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q433_RS20815 (Q433_22550) yyaE 4024512..4026515 (-) 2004 WP_029726086.1 molybdopterin-dependent oxidoreductase -
  Q433_RS20820 (Q433_22555) yyzM 4026566..4026772 (-) 207 WP_003226838.1 DUF951 family protein -
  Q433_RS20825 (Q433_22560) - 4026866..4027882 (-) 1017 WP_010886647.1 membrane protein -
  Q433_RS20830 (Q433_22565) yyaC 4028323..4028940 (+) 618 WP_015715079.1 spore protease YyaC -
  Q433_RS20835 (Q433_22570) spo0J 4028979..4029827 (-) 849 WP_015715080.1 stage 0 sporulation protein Spo0J Regulator
  Q433_RS20840 (Q433_22575) soj 4029820..4030581 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  Q433_RS20845 (Q433_22585) yyaB 4030829..4031269 (+) 441 WP_015250779.1 PH domain-containing protein -
  Q433_RS20850 (Q433_22590) noc 4031320..4032171 (-) 852 WP_015250778.1 nucleoid occlusion protein -
  Q433_RS20855 (Q433_22595) rsmG 4032293..4033012 (-) 720 WP_003226827.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32226.21 Da        Isoelectric Point: 8.3881

>NTDB_id=104433 Q433_RS20835 WP_015715080.1 4028979..4029827(-) (spo0J) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKELVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=104433 Q433_RS20835 WP_015715080.1 4028979..4029827(-) (spo0J) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCTATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTCTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTCGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTCCTTGGCTTGAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTTAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AATTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACTTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387

Multiple sequence alignment