Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ACEPOS_RS12580 | Genome accession | NZ_CP168497 |
| Coordinates | 2518108..2518407 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain J23 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2513108..2523407
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPOS_RS12540 (ACEPOS_12540) | - | 2513169..2513372 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| ACEPOS_RS12545 (ACEPOS_12545) | - | 2513369..2514355 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| ACEPOS_RS12550 (ACEPOS_12550) | - | 2514355..2514684 (+) | 330 | WP_020977297.1 | MTH1187 family thiamine-binding protein | - |
| ACEPOS_RS12555 (ACEPOS_12555) | - | 2514681..2515304 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ACEPOS_RS12560 (ACEPOS_12560) | comGA | 2515356..2516330 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACEPOS_RS12565 (ACEPOS_12565) | comGB | 2516302..2517372 (+) | 1071 | WP_000776407.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACEPOS_RS12570 (ACEPOS_12570) | comGC | 2517386..2517697 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACEPOS_RS12575 (ACEPOS_12575) | comGD | 2517675..2518121 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACEPOS_RS12580 (ACEPOS_12580) | comGE | 2518108..2518407 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ACEPOS_RS12585 (ACEPOS_12585) | comGF | 2518325..2518822 (+) | 498 | WP_020977296.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACEPOS_RS12590 (ACEPOS_12590) | - | 2518919..2519065 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACEPOS_RS12595 (ACEPOS_12595) | - | 2519055..2519579 (+) | 525 | WP_020977295.1 | shikimate kinase | - |
| ACEPOS_RS12600 (ACEPOS_12600) | gcvT | 2519738..2520829 (+) | 1092 | WP_020977294.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACEPOS_RS12605 (ACEPOS_12605) | gcvPA | 2520849..2522195 (+) | 1347 | WP_020977293.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1044320 ACEPOS_RS12580 WP_000844413.1 2518108..2518407(+) (comGE) [Staphylococcus aureus strain J23]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1044320 ACEPOS_RS12580 WP_000844413.1 2518108..2518407(+) (comGE) [Staphylococcus aureus strain J23]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |