Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   Q433_RS20185 Genome accession   NZ_CP007409
Coordinates   3901441..3902130 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3896441..3907130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q433_RS20165 (Q433_21875) yxeA 3897346..3897693 (-) 348 WP_003227084.1 YxeA family protein -
  Q433_RS20170 (Q433_21880) yxdM 3897707..3899575 (-) 1869 WP_029318589.1 ABC transporter permease YxdM -
  Q433_RS20175 (Q433_21885) yxdL 3899550..3900323 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  Q433_RS20180 (Q433_21890) yxdK 3900467..3901444 (-) 978 WP_015385109.1 two-component system sensor histidine kinase YxdK -
  Q433_RS20185 (Q433_21895) braR 3901441..3902130 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  Q433_RS20190 (Q433_21900) iolJ 3902238..3903110 (-) 873 WP_014478478.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  Q433_RS20195 (Q433_21905) iolI 3903131..3903967 (-) 837 WP_015715014.1 2-keto-myo-inositol isomerase -
  Q433_RS20200 (Q433_21910) iolH 3904053..3904922 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  Q433_RS20205 (Q433_21915) iolG 3904942..3905976 (-) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=104427 Q433_RS20185 WP_003243527.1 3901441..3902130(-) (braR) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=104427 Q433_RS20185 WP_003243527.1 3901441..3902130(-) (braR) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCTGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment