Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACCK33_RS10090 Genome accession   NZ_CP168442
Coordinates   2025368..2026411 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain J03     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2020368..2031411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCK33_RS10060 (ACCK33_10060) - 2020786..2022042 (-) 1257 WP_001795438.1 aminopeptidase -
  ACCK33_RS10065 (ACCK33_10065) - 2022045..2022245 (-) 201 WP_000180461.1 DUF1128 family protein -
  ACCK33_RS10070 (ACCK33_10070) - 2022392..2022856 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  ACCK33_RS10075 (ACCK33_10075) - 2022863..2023138 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  ACCK33_RS10080 (ACCK33_10080) - 2023416..2024633 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  ACCK33_RS10085 (ACCK33_10085) vraR 2024749..2025378 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  ACCK33_RS10090 (ACCK33_10090) vraS 2025368..2026411 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  ACCK33_RS10095 (ACCK33_10095) liaF 2026408..2027109 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  ACCK33_RS10100 (ACCK33_10100) - 2027124..2027510 (-) 387 WP_001110179.1 hypothetical protein -
  ACCK33_RS10105 (ACCK33_10105) map 2027727..2028485 (-) 759 WP_138642981.1 type I methionyl aminopeptidase -
  ACCK33_RS10110 (ACCK33_10110) - 2029072..2030058 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  ACCK33_RS10115 (ACCK33_10115) - 2030489..2030902 (-) 414 WP_001549145.1 hypothetical protein -
  ACCK33_RS10120 (ACCK33_10120) - 2030931..2031041 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1044183 ACCK33_RS10090 WP_001017131.1 2025368..2026411(-) (vraS) [Staphylococcus aureus strain J03]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1044183 ACCK33_RS10090 WP_001017131.1 2025368..2026411(-) (vraS) [Staphylococcus aureus strain J03]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment