Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG   Type   Machinery gene
Locus tag   QOR68_RS01135 Genome accession   NZ_OX460984
Coordinates   191264..191635 (+) Length   123 a.a.
NCBI ID   WP_000601104.1    Uniprot ID   Q8E233
Organism   Streptococcus agalactiae isolate MRI Z2-172     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 186264..196635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR68_RS01100 - 187440..187805 (+) 366 WP_000285373.1 DUF1033 family protein -
  QOR68_RS01105 comGA 187978..188949 (+) 972 WP_000250805.1 competence type IV pilus ATPase ComGA Machinery gene
  QOR68_RS01110 comGB 188843..189886 (+) 1044 WP_223295889.1 competence type IV pilus assembly protein ComGB Machinery gene
  QOR68_RS01115 comGC/cglC 189883..190212 (+) 330 WP_000793380.1 competence type IV pilus major pilin ComGC Machinery gene
  QOR68_RS01120 comGD 190187..190600 (+) 414 WP_000244261.1 competence type IV pilus minor pilin ComGD Machinery gene
  QOR68_RS01125 comGE 190572..190871 (+) 300 WP_000234804.1 competence type IV pilus minor pilin ComGE Machinery gene
  QOR68_RS01130 comGF 190825..191286 (+) 462 WP_001878820.1 competence type IV pilus minor pilin ComGF Machinery gene
  QOR68_RS01135 comGG 191264..191635 (+) 372 WP_000601104.1 competence type IV pilus minor pilin ComGG Machinery gene
  QOR68_RS01140 comGH 191750..192724 (+) 975 WP_001008574.1 N-6 DNA methylase Machinery gene
  QOR68_RS01145 - 192756..193949 (+) 1194 WP_000047534.1 acetate kinase -
  QOR68_RS01150 - 194101..194307 (+) 207 WP_000798241.1 helix-turn-helix transcriptional regulator -
  QOR68_RS01155 - 194366..194503 (+) 138 WP_001865900.1 hypothetical protein -
  QOR68_RS01160 - 194544..194999 (+) 456 WP_000905673.1 hypothetical protein -
  QOR68_RS01165 - 195068..195733 (+) 666 WP_000008113.1 type II CAAX endopeptidase family protein -
  QOR68_RS01170 proC 195754..196524 (-) 771 WP_001865901.1 pyrroline-5-carboxylate reductase -

Sequence


Protein


Download         Length: 123 a.a.        Molecular weight: 13879.09 Da        Isoelectric Point: 10.0693

>NTDB_id=1044166 QOR68_RS01135 WP_000601104.1 191264..191635(+) (comGG) [Streptococcus agalactiae isolate MRI Z2-172]
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYASYLQ
EGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH

Nucleotide


Download         Length: 372 bp        

>NTDB_id=1044166 QOR68_RS01135 WP_000601104.1 191264..191635(+) (comGG) [Streptococcus agalactiae isolate MRI Z2-172]
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGTGACTCCATATCAGGAAAATGTTATTTTACAGGAGGATATGCTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAACAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8E233

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

44.554

82.114

0.366

  comGG Streptococcus mutans UA159

44.554

82.114

0.366


Multiple sequence alignment