Detailed information NTG0104408

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: R8965_RS06060
• Genome accession: NZ_AP028338
• Coordinates: 1116996..1117733 (+)
• Length: 245 a.a.
• NCBI ID: WP_002834520.1
• Uniprot ID: -
• Organism: Campylobacter coli strain BCH-10307
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1111996..1122733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8965_RS06030 (B10307_11850)	rpsF	1112144..1112521 (+)	378	WP_002777082.1	30S ribosomal protein S6	-
R8965_RS06035 (B10307_11860)	-	1112530..1113078 (+)	549	WP_002777084.1	single-stranded DNA-binding protein	-
R8965_RS06040 (B10307_11870)	rpsR	1113089..1113349 (+)	261	WP_002777087.1	30S ribosomal protein S18	-
R8965_RS06045 (B10307_11880)	lon	1113405..1115780 (-)	2376	WP_317727853.1	endopeptidase La	-
R8965_RS06050 (B10307_11890)	-	1115796..1116443 (-)	648	WP_002777091.1	outer membrane protein assembly factor BamD	-
R8965_RS06055 (B10307_11900)	fliW	1116607..1116996 (+)	390	WP_002777093.1	flagellar assembly protein FliW	-
R8965_RS06060 (B10307_11910)	proC	1116996..1117733 (+)	738	WP_002834520.1	pyrroline-5-carboxylate reductase	Machinery gene
R8965_RS06065 (B10307_11920)	ctsT	1117730..1118035 (+)	306	WP_002834517.1	hypothetical protein	Machinery gene
R8965_RS06070 (B10307_11930)	-	1118028..1118696 (+)	669	WP_002797569.1	hypothetical protein	-
R8965_RS06075 (B10307_11940)	-	1118693..1119145 (+)	453	WP_002777117.1	hypothetical protein	-
R8965_RS06080 (B10307_11950)	-	1119138..1119767 (-)	630	WP_002777119.1	uroporphyrinogen-III synthase	-
R8965_RS06085 (B10307_11960)	thiE	1119745..1120377 (-)	633	WP_002834515.1	thiamine phosphate synthase	-
R8965_RS06090 (B10307_11970)	thiD	1120367..1121179 (-)	813	WP_002797568.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
R8965_RS06095 (B10307_11980)	-	1121179..1121862 (-)	684	WP_002791740.1	3-methyladenine DNA glycosylase	-
R8965_RS06100 (B10307_11990)	-	1121859..1122620 (-)	762	WP_025431509.1	ATP-binding protein	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26796.25 Da
• Isoelectric Point: 9.5957

>NTDB_id=104408 R8965_RS06060 WP_002834520.1 1116996..1117733(+) (proC) [Campylobacter coli strain BCH-10307]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYKLNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=104408 R8965_RS06060 WP_002834520.1 1116996..1117733(+) (proC) [Campylobacter coli strain BCH-10307]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATAAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	81.25	97.959	0.796