Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   Q433_RS15990 Genome accession   NZ_CP007409
Coordinates   3069073..3069942 (-) Length   289 a.a.
NCBI ID   WP_015714626.1    Uniprot ID   C0JBL3
Organism   Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3064073..3074942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q433_RS15955 (Q433_17310) mrpE 3064246..3064722 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  Q433_RS15960 (Q433_17315) mrpF 3064722..3065006 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  Q433_RS15965 (Q433_17320) mnhG 3064990..3065364 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  Q433_RS15970 (Q433_17325) yuxO 3065403..3065783 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  Q433_RS15975 (Q433_17330) comA 3065802..3066446 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  Q433_RS15980 (Q433_17335) comP 3066527..3068839 (-) 2313 WP_038427877.1 histidine kinase Regulator
  Q433_RS15985 (Q433_17340) comX 3068855..3069076 (-) 222 WP_014114983.1 competence pheromone ComX -
  Q433_RS15990 (Q433_17345) comQ 3069073..3069942 (-) 870 WP_015714626.1 polyprenyl synthetase family protein Regulator
  Q433_RS15995 (Q433_17350) degQ 3070127..3070267 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  Q433_RS21680 - 3070489..3070614 (+) 126 WP_121549029.1 hypothetical protein -
  Q433_RS16000 (Q433_17360) - 3070729..3071097 (+) 369 WP_038427878.1 hypothetical protein -
  Q433_RS16005 (Q433_17365) pdeH 3071073..3072302 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  Q433_RS16010 (Q433_17370) pncB 3072439..3073911 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  Q433_RS16015 (Q433_17375) pncA 3073927..3074478 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 289 a.a.        Molecular weight: 33019.53 Da        Isoelectric Point: 4.6894

>NTDB_id=104406 Q433_RS15990 WP_015714626.1 3069073..3069942(-) (comQ) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MKEIVDENISNEDLKTKLISFIEEKKQFSFAELAYHHYIAFDGKDVTAIELLASGIELLILSADIFDDIEDKDNLQASWM
KIDPSIVINAATTLYTLSLQVISLVSNNPQLLSLTLQYSLQSLQGQHADLNVKISSESEYIEMIKLKSGSLVTLPSVLGV
YLATGEINETVEEYSLYLGIVEQIANDHHGLYYPDNNDIKTRHNLAFYYLKNKYNQSSIDLLNFYAQENNQINNMDELKK
RLQGSGVIQYLNVIKNIALENFKESFKKLRLDEQRKNKLLDQLLRGNIN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=104406 Q433_RS15990 WP_015714626.1 3069073..3069942(-) (comQ) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
ATGAAGGAGATTGTAGATGAAAATATTTCAAATGAAGACTTAAAAACAAAACTTATTTCTTTTATTGAAGAAAAAAAACA
ATTTTCATTTGCAGAATTAGCTTATCACCATTACATAGCATTTGACGGAAAAGATGTTACAGCAATTGAGTTGTTGGCTT
CTGGTATAGAACTTTTAATTTTATCTGCTGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAAATAGATCCTTCGATAGTAATTAACGCAGCTACTACACTTTATACATTAAGTTTGCAAGTGATAAGTTTAGTTTCAAA
CAATCCGCAACTTCTAAGTCTGACTTTACAATATTCACTTCAATCTTTACAAGGGCAACATGCAGATTTAAATGTAAAAA
TCTCTTCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCAGGTTCTCTTGTAACATTGCCTAGTGTTCTTGGTGTA
TATTTGGCAACTGGAGAAATTAATGAAACAGTCGAGGAGTATTCACTTTATTTGGGTATAGTCGAGCAAATTGCGAATGA
TCACCATGGGCTATATTATCCTGACAATAATGACATAAAAACTAGACACAATCTTGCCTTCTACTATCTAAAAAATAAAT
ATAACCAATCATCGATTGACTTATTAAATTTTTATGCGCAAGAAAATAATCAGATAAATAACATGGATGAATTGAAAAAG
AGGTTACAAGGATCAGGTGTAATCCAATACCTGAATGTTATTAAAAATATAGCACTGGAAAATTTTAAAGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAGAATAAACTACTTGATCAATTATTAAGGGGGAATATAAATTGA

Domains


Predicted by InterProScan.

(45-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB C0JBL3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

43.056

99.654

0.429


Multiple sequence alignment