Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   R8575_RS07685 Genome accession   NZ_AP028336
Coordinates   1484892..1486076 (-) Length   394 a.a.
NCBI ID   WP_002868491.1    Uniprot ID   A0A0Q3JWH1
Organism   Campylobacter jejuni strain BCH-10190     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1479892..1491076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8575_RS07660 (B10190_15140) fliL 1481040..1481576 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  R8575_RS07665 (B10190_15150) acpS 1481576..1481923 (+) 348 WP_002780441.1 holo-ACP synthase -
  R8575_RS07670 (B10190_15160) - 1481924..1482343 (-) 420 WP_002780440.1 hypothetical protein -
  R8575_RS07675 (B10190_15170) - 1482340..1483701 (-) 1362 WP_317654066.1 cytochrome P450 -
  R8575_RS07680 (B10190_15180) - 1483698..1484819 (-) 1122 WP_002868490.1 hypothetical protein -
  R8575_RS07685 (B10190_15190) kpsS 1484892..1486076 (-) 1185 WP_002868491.1 capsule polysaccharide modification protein KpsS Regulator
  R8575_RS07690 (B10190_15200) kpsC 1486073..1488142 (-) 2070 WP_002875993.1 capsular polysaccharide biosynthesis protein -
  R8575_RS07695 (B10190_15210) cysC 1488139..1488651 (-) 513 WP_002875994.1 cytidine diphosphoramidate kinase -
  R8575_RS07700 (B10190_15220) - 1488641..1489402 (-) 762 WP_002869138.1 CTP:phosphoglutamine cytidylyltransferase -
  R8575_RS07705 (B10190_15230) - 1489404..1490006 (-) 603 WP_002860377.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46855.56 Da        Isoelectric Point: 9.9031

>NTDB_id=104396 R8575_RS07685 WP_002868491.1 1484892..1486076(-) (kpsS) [Campylobacter jejuni strain BCH-10190]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=104396 R8575_RS07685 WP_002868491.1 1484892..1486076(-) (kpsS) [Campylobacter jejuni strain BCH-10190]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATTTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Q3JWH1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.731

100

0.987


Multiple sequence alignment