Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8575_RS06035 | Genome accession | NZ_AP028336 |
| Coordinates | 1150990..1151292 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10190 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1145990..1156292
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8575_RS06010 (B10190_11800) | rpsR | 1146353..1146613 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8575_RS06015 (B10190_11810) | lon | 1146673..1149048 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8575_RS06020 (B10190_11820) | - | 1149065..1149712 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8575_RS06025 (B10190_11830) | fliW | 1149873..1150262 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8575_RS06030 (B10190_11840) | proC | 1150262..1150993 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8575_RS06035 (B10190_11850) | ctsT | 1150990..1151292 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8575_RS06040 (B10190_11860) | - | 1151289..1151951 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8575_RS06045 (B10190_11870) | - | 1151948..1152400 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8575_RS06050 (B10190_11880) | hemD | 1152397..1153026 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| R8575_RS06055 (B10190_11890) | thiE | 1153004..1153636 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8575_RS06060 (B10190_11900) | thiD | 1153626..1154438 (-) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8575_RS06065 (B10190_11910) | - | 1154435..1155121 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8575_RS06070 (B10190_11920) | - | 1155118..1155879 (-) | 762 | WP_317649899.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104387 R8575_RS06035 WP_002853046.1 1150990..1151292(+) (ctsT) [Campylobacter jejuni strain BCH-10190]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104387 R8575_RS06035 WP_002853046.1 1150990..1151292(+) (ctsT) [Campylobacter jejuni strain BCH-10190]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |