Detailed information NTG1043769

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACEI37_RS12630
• Genome accession: NZ_CP168303
• Coordinates: 337997..339166 (-)
• Length: 389 a.a.
• NCBI ID: WP_373379167.1
• Uniprot ID: -
• Organism: Cupriavidus nantongensis strain HB4B5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 332997..344166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEI37_RS12605 (ACEI37_12605)	ntrB	333071..333961 (-)	891	WP_373379163.1	nitrate ABC transporter permease	-
ACEI37_RS12610 (ACEI37_12610)	-	333992..335326 (-)	1335	WP_373379164.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
ACEI37_RS12615 (ACEI37_12615)	-	335727..336365 (-)	639	WP_373379165.1	ANTAR domain-containing response regulator	-
ACEI37_RS12620 (ACEI37_12620)	-	336574..337275 (+)	702	WP_116336046.1	fumarylacetoacetate hydrolase family protein	-
ACEI37_RS12625 (ACEI37_12625)	maiA	337280..337927 (+)	648	WP_373379166.1	maleylacetoacetate isomerase	-
ACEI37_RS12630 (ACEI37_12630)	pilA	337997..339166 (-)	1170	WP_373379167.1	signal recognition particle-docking protein FtsY	Machinery gene
ACEI37_RS12635 (ACEI37_12635)	-	339395..340951 (+)	1557	WP_373379168.1	M16 family metallopeptidase	-
ACEI37_RS12640 (ACEI37_12640)	-	340962..342344 (+)	1383	WP_373379169.1	M16 family metallopeptidase	-
ACEI37_RS12645 (ACEI37_12645)	rsmD	342418..343065 (+)	648	WP_373379170.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACEI37_RS12650 (ACEI37_12650)	coaD	343299..343784 (+)	486	WP_062796627.1	pantetheine-phosphate adenylyltransferase	-
ACEI37_RS12655 (ACEI37_12655)	-	343852..344112 (+)	261	WP_012351650.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 389 a.a.
• Molecular weight: 41379.00 Da
• Isoelectric Point: 6.7479

>NTDB_id=1043769 ACEI37_RS12630 WP_373379167.1 337997..339166(-) (pilA) [Cupriavidus nantongensis strain HB4B5]
MFSFWKKRKAEPAPIEAPAPAPAPTPEVPAPAPAPSPTPTPTPTPSPSPAPAPVPVPVPVPVPAQVPPPAPAPVAAEALE
LVPPPAPSAEARQGWMQRLRTGLSKTSRNLGTLFVGVKVDEDLFEELETALLMADAGVEATEYLLGELRKRVRSERIETA
EGVKAALRELLTQLLRPLEKTMALGREQPLVMMIAGVNGAGKTTSIGKLCKHFQRYDQKVLLAAGDTFRAAAREQLTIWG
ERNNVTVVAQESGDPAAVIFDAVNAAKARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPSAPHEVLLVIDANTGQ
NALQQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFAEALLG

Nucleotide

• Length: 1170 bp

>NTDB_id=1043769 ACEI37_RS12630 WP_373379167.1 337997..339166(-) (pilA) [Cupriavidus nantongensis strain HB4B5]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCGGCCCCCATCGAGGCGCCCGCGCCAGCCCCGGCCCCCACGCCCGA
GGTGCCCGCGCCCGCACCGGCACCGTCCCCGACGCCAACGCCAACGCCAACGCCTTCGCCTTCGCCCGCCCCTGCGCCCG
TGCCGGTTCCCGTGCCCGTCCCCGTGCCGGCGCAAGTGCCTCCGCCCGCGCCAGCGCCGGTGGCAGCCGAGGCGCTGGAA
CTGGTGCCGCCGCCCGCCCCCAGCGCCGAAGCCCGGCAGGGCTGGATGCAGCGCCTGCGCACCGGCCTGTCCAAGACCAG
CCGCAACCTCGGCACGCTGTTCGTCGGCGTCAAGGTCGACGAAGACCTGTTCGAGGAACTGGAAACCGCGCTGCTGATGG
CCGACGCCGGCGTCGAAGCCACCGAGTACCTGCTGGGCGAACTGCGCAAGCGCGTCAGGTCCGAGCGCATCGAAACCGCC
GAGGGCGTCAAGGCGGCGCTGCGCGAGCTGCTGACGCAACTGCTGCGCCCGCTCGAAAAGACCATGGCGCTGGGCCGCGA
GCAGCCGCTGGTGATGATGATCGCGGGCGTCAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCC
AGCGCTATGACCAGAAGGTGCTGCTGGCCGCCGGTGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGACGATCTGGGGG
GAACGCAACAACGTCACCGTGGTGGCGCAGGAAAGCGGCGACCCCGCGGCGGTGATCTTCGACGCGGTCAACGCCGCCAA
GGCGCGCGGCATCGACATCGTCATGGCCGACACCGCCGGGCGCCTGCCGACGCAGCTGCACCTGATGGAAGAGCTGAAGA
AGGTCAAGCGCGTGATCAGCAAGGCCATGCCGAGCGCGCCGCACGAGGTGCTGCTGGTCATCGATGCCAATACCGGCCAG
AACGCCCTGCAGCAAACCCGCGCCTTCGACGACGCGCTCGGGCTCACCGGCCTGATCGTGACCAAGCTCGACGGCACCGC
CAAGGGCGGCATCCTGGCGGCGATCGCGCGCCAGCGCCCGGTGCCGGTGTACTTCATCGGTGTCGGCGAGAAGGTGGAAG
ACCTGCAGCCGTTCAAGGCGGAAGAGTTCGCCGAGGCGCTGCTGGGGTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (190-389)

• SRP54-type protein, helical bundle domain (SRP54_N) (113-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.24	100	0.537