Detailed information NTG0104361

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: R8628_RS06130
• Genome accession: NZ_AP028335
• Coordinates: 1160073..1161032 (+)
• Length: 319 a.a.
• NCBI ID: WP_240683010.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-10174
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1155073..1166032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8628_RS06110 (B10174_11990)	-	1155743..1156675 (-)	933	WP_276323184.1	glycosyltransferase family 2 protein	-
R8628_RS06115 (B10174_12000)	-	1156740..1158125 (+)	1386	WP_052804524.1	hypothetical protein	-
R8628_RS06120 (B10174_12010)	-	1158127..1159203 (+)	1077	WP_074468978.1	hypothetical protein	-
R8628_RS06125 (B10174_12020)	-	1159200..1160015 (-)	816	WP_317653248.1	glycosyltransferase family 2 protein	-
R8628_RS06130 (B10174_12030)	waaF	1160073..1161032 (+)	960	WP_240683010.1	lipopolysaccharide heptosyltransferase II	Regulator
R8628_RS06135 (B10174_12040)	gmhA	1161013..1161573 (-)	561	WP_317653252.1	D-sedoheptulose 7-phosphate isomerase	-
R8628_RS06140 (B10174_12050)	rfaE1	1161570..1162955 (-)	1386	WP_100624276.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
R8628_RS06145 (B10174_12060)	rfaD	1162948..1163901 (-)	954	WP_002867398.1	ADP-glyceromanno-heptose 6-epimerase	-
R8628_RS06150 (B10174_12070)	gmhB	1163902..1164463 (-)	562	Protein_1189	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
R8628_RS06155 (B10174_12080)	-	1164544..1164846 (+)	303	WP_002852762.1	c-type cytochrome	-
R8628_RS06160 (B10174_12090)	ccoS	1164869..1165075 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36763.36 Da
• Isoelectric Point: 10.3624

>NTDB_id=104361 R8628_RS06130 WP_240683010.1 1160073..1161032(+) (waaF) [Campylobacter jejuni strain BCH-10174]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPSSKIIIENKQSRYKQALSLRKKLGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCDEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDFFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=104361 R8628_RS06130 WP_240683010.1 1160073..1161032(+) (waaF) [Campylobacter jejuni strain BCH-10174]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCCATAAAAGAACA
CTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTGGTTTCTACGGCACTTTTTAAGGAATTTCCTAGTTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAAAACTTGGCAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAACTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTCTGCGATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAACCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGTGATTTTTTCATCACAAACGACAGT
GGCCCTATGCACATAAGTGCGGTTTACAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACCCAAACCTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.476	100	0.925