Detailed information NTG1043485

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: ACD269_RS02775
• Genome accession: NZ_CP168260
• Coordinates: 533310..533576 (+)
• Length: 88 a.a.
• NCBI ID: WP_001844589.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FC2
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	532739..533187	533310..533576	flank	123

Gene organization within MGE regions

Location: 532739..533576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACD269_RS02770 (ACD269_02770)	-	532739..533184 (+)	446	Protein_545	transposase	-
ACD269_RS02775 (ACD269_02775)	HI0659	533310..533576 (+)	267	WP_001844589.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9629.24 Da
• Isoelectric Point: 5.1633

>NTDB_id=1043485 ACD269_RS02775 WP_001844589.1 533310..533576(+) (HI0659) [Streptococcus pneumoniae strain FC2]
MEGCPSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVLASLGKILAV
VRLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=1043485 ACD269_RS02775 WP_001844589.1 533310..533576(+) (HI0659) [Streptococcus pneumoniae strain FC2]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAACTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGATACTAGCAGTC
GTCCGACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (28-75)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	59.74	87.5	0.523