Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   QOR49_RS07110 Genome accession   NZ_OX460938
Coordinates   1395388..1395828 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae isolate MRI Z2-318     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1390388..1400828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR49_RS07095 - 1391046..1391672 (-) 627 WP_000449636.1 GTP pyrophosphokinase -
  QOR49_RS07100 rcrQ 1391780..1393534 (-) 1755 WP_000851081.1 ABC transporter ATP-binding protein Regulator
  QOR49_RS07105 rcrP 1393524..1395341 (-) 1818 WP_000481821.1 ABC transporter ATP-binding protein Regulator
  QOR49_RS07110 rcrR 1395388..1395828 (-) 441 WP_000431168.1 MarR family transcriptional regulator Regulator
  QOR49_RS07115 - 1396097..1398169 (+) 2073 WP_000726914.1 bifunctional metallophosphatase/5'-nucleotidase -
  QOR49_RS07120 - 1398206..1398616 (-) 411 WP_000594936.1 peptide deformylase -
  QOR49_RS07125 gdhA 1398686..1400035 (-) 1350 WP_000200448.1 NADP-specific glutamate dehydrogenase -
  QOR49_RS07130 - 1400203..1400712 (+) 510 WP_000870955.1 DUF308 domain-containing protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=1043469 QOR49_RS07110 WP_000431168.1 1395388..1395828(-) (rcrR) [Streptococcus agalactiae isolate MRI Z2-318]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=1043469 QOR49_RS07110 WP_000431168.1 1395388..1395828(-) (rcrR) [Streptococcus agalactiae isolate MRI Z2-318]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411