Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACEN2X_RS23520 | Genome accession | NZ_CP168240 |
| Coordinates | 3147185..3148318 (+) | Length | 377 a.a. |
| NCBI ID | WP_014618044.1 | Uniprot ID | F6G4B5 |
| Organism | Ralstonia solanacearum strain 102-3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3142185..3153318
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEN2X_RS23495 (ACEN2X_23495) | - | 3142553..3142801 (-) | 249 | WP_003262548.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| ACEN2X_RS23500 (ACEN2X_23500) | coaD | 3142852..3143358 (-) | 507 | WP_003262550.1 | pantetheine-phosphate adenylyltransferase | - |
| ACEN2X_RS23505 (ACEN2X_23505) | rsmD | 3143554..3144210 (-) | 657 | WP_014618041.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| ACEN2X_RS23510 (ACEN2X_23510) | - | 3144288..3145631 (-) | 1344 | WP_014618042.1 | pitrilysin family protein | - |
| ACEN2X_RS23515 (ACEN2X_23515) | - | 3145631..3147124 (-) | 1494 | WP_039550994.1 | pitrilysin family protein | - |
| ACEN2X_RS23520 (ACEN2X_23520) | pilA | 3147185..3148318 (+) | 1134 | WP_014618044.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| ACEN2X_RS23525 (ACEN2X_23525) | maiA | 3148524..3149174 (-) | 651 | WP_014618045.1 | maleylacetoacetate isomerase | - |
| ACEN2X_RS23530 (ACEN2X_23530) | - | 3149178..3149879 (-) | 702 | WP_014618046.1 | fumarylacetoacetate hydrolase family protein | - |
| ACEN2X_RS23535 (ACEN2X_23535) | - | 3150030..3150656 (+) | 627 | WP_014618047.1 | ANTAR domain-containing response regulator | - |
| ACEN2X_RS23540 (ACEN2X_23540) | - | 3150935..3152197 (+) | 1263 | WP_014618048.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
| ACEN2X_RS23545 (ACEN2X_23545) | ntrB | 3152247..3153098 (+) | 852 | WP_042549711.1 | nitrate ABC transporter permease | - |
Sequence
Protein
Download Length: 377 a.a. Molecular weight: 40168.48 Da Isoelectric Point: 5.8101
>NTDB_id=1043404 ACEN2X_RS23520 WP_014618044.1 3147185..3148318(+) (pilA) [Ralstonia solanacearum strain 102-3]
MFSFWKKRKAEPQPAAEPAPPAAAPEAVQAPVPAPVASPTPAPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVMEQAR
KGWMSRLRSGLSKTSKNLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAESVKTALRDLLV
ELLHPLEKTMVLGRDQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQES
GDPAAVIFDAVNAARARGIDIVMADTAGRLPTQMHLMEELKKVRRVIGKAMVTAPHETLLVIDANTGQNALAQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
MFSFWKKRKAEPQPAAEPAPPAAAPEAVQAPVPAPVASPTPAPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVMEQAR
KGWMSRLRSGLSKTSKNLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAESVKTALRDLLV
ELLHPLEKTMVLGRDQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQES
GDPAAVIFDAVNAARARGIDIVMADTAGRLPTQMHLMEELKKVRRVIGKAMVTAPHETLLVIDANTGQNALAQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
Nucleotide
Download Length: 1134 bp
>NTDB_id=1043404 ACEN2X_RS23520 WP_014618044.1 3147185..3148318(+) (pilA) [Ralstonia solanacearum strain 102-3]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCCGCCGAACCCGCGCCGCCCGCCGCCGCGCCCGAAGC
CGTCCAGGCCCCGGTACCGGCCCCGGTTGCCTCCCCCACCCCTGCCCCTGCACCCGCCCCGGTTGCCGTGCCGGATACGC
CGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTACCGACGCCGCCCGTGATGGAGCAGGCGCGC
AAGGGCTGGATGTCTCGCCTGCGCTCGGGGCTGTCGAAGACCAGCAAGAACCTGACCACGCTGTTCGTCGGCGTGAAGGT
GGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTGGATGCCACCGAATACCTGCTGG
ACGAGCTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGAGCGTGAAGACCGCGCTGCGCGACCTGCTCGTC
GAGCTGCTGCACCCGCTGGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGATGGTGATCATGATCGCGGGCGTCAACGG
TGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAGTCCGTGCTGCTGGCCGCCGGCG
ACACGTTCCGCGCCGCCGCCCGCGAGCAACTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAGTCG
GGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGTGCCCGCGGCATCGACATTGTCATGGCCGACACCGC
CGGCCGCCTGCCGACCCAGATGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCCATGGTGACGG
CGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACGATGCA
CTCGGCCTGACCGGCCTGATCGTCACTAAGCTGGACGGCACCGCCAAAGGTGGCATCCTGGCCGCCATCGCGCGGCAGCG
GCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAACAGGTCGAAGACCTGCAACCGTTCTCCGCGCGCGAATTCGCCGACG
CGCTGCTGGGCTGA
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCCGCCGAACCCGCGCCGCCCGCCGCCGCGCCCGAAGC
CGTCCAGGCCCCGGTACCGGCCCCGGTTGCCTCCCCCACCCCTGCCCCTGCACCCGCCCCGGTTGCCGTGCCGGATACGC
CGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTACCGACGCCGCCCGTGATGGAGCAGGCGCGC
AAGGGCTGGATGTCTCGCCTGCGCTCGGGGCTGTCGAAGACCAGCAAGAACCTGACCACGCTGTTCGTCGGCGTGAAGGT
GGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTGGATGCCACCGAATACCTGCTGG
ACGAGCTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGAGCGTGAAGACCGCGCTGCGCGACCTGCTCGTC
GAGCTGCTGCACCCGCTGGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGATGGTGATCATGATCGCGGGCGTCAACGG
TGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAGTCCGTGCTGCTGGCCGCCGGCG
ACACGTTCCGCGCCGCCGCCCGCGAGCAACTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAGTCG
GGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGTGCCCGCGGCATCGACATTGTCATGGCCGACACCGC
CGGCCGCCTGCCGACCCAGATGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCCATGGTGACGG
CGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACGATGCA
CTCGGCCTGACCGGCCTGATCGTCACTAAGCTGGACGGCACCGCCAAAGGTGGCATCCTGGCCGCCATCGCGCGGCAGCG
GCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAACAGGTCGAAGACCTGCAACCGTTCTCCGCGCGCGAATTCGCCGACG
CGCTGCTGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
51.202 |
100 |
0.565 |