Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACEN2Y_RS23550 | Genome accession | NZ_CP168237 |
| Coordinates | 3147285..3148418 (+) | Length | 377 a.a. |
| NCBI ID | WP_014618044.1 | Uniprot ID | F6G4B5 |
| Organism | Ralstonia solanacearum strain 115-4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3142285..3153418
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEN2Y_RS23525 (ACEN2Y_23525) | - | 3142653..3142901 (-) | 249 | WP_003262548.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| ACEN2Y_RS23530 (ACEN2Y_23530) | coaD | 3142952..3143458 (-) | 507 | WP_003262550.1 | pantetheine-phosphate adenylyltransferase | - |
| ACEN2Y_RS23535 (ACEN2Y_23535) | rsmD | 3143654..3144310 (-) | 657 | WP_014618041.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| ACEN2Y_RS23540 (ACEN2Y_23540) | - | 3144388..3145731 (-) | 1344 | WP_014618042.1 | pitrilysin family protein | - |
| ACEN2Y_RS23545 (ACEN2Y_23545) | - | 3145731..3147224 (-) | 1494 | WP_039550994.1 | pitrilysin family protein | - |
| ACEN2Y_RS23550 (ACEN2Y_23550) | pilA | 3147285..3148418 (+) | 1134 | WP_014618044.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| ACEN2Y_RS23555 (ACEN2Y_23555) | maiA | 3148624..3149274 (-) | 651 | WP_014618045.1 | maleylacetoacetate isomerase | - |
| ACEN2Y_RS23560 (ACEN2Y_23560) | - | 3149278..3149979 (-) | 702 | WP_014618046.1 | fumarylacetoacetate hydrolase family protein | - |
| ACEN2Y_RS23565 (ACEN2Y_23565) | - | 3150130..3150756 (+) | 627 | WP_014618047.1 | ANTAR domain-containing response regulator | - |
| ACEN2Y_RS23570 (ACEN2Y_23570) | - | 3151035..3152297 (+) | 1263 | WP_014618048.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
| ACEN2Y_RS23575 (ACEN2Y_23575) | ntrB | 3152347..3153198 (+) | 852 | WP_042549711.1 | nitrate ABC transporter permease | - |
Sequence
Protein
Download Length: 377 a.a. Molecular weight: 40168.48 Da Isoelectric Point: 5.8101
>NTDB_id=1043383 ACEN2Y_RS23550 WP_014618044.1 3147285..3148418(+) (pilA) [Ralstonia solanacearum strain 115-4]
MFSFWKKRKAEPQPAAEPAPPAAAPEAVQAPVPAPVASPTPAPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVMEQAR
KGWMSRLRSGLSKTSKNLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAESVKTALRDLLV
ELLHPLEKTMVLGRDQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQES
GDPAAVIFDAVNAARARGIDIVMADTAGRLPTQMHLMEELKKVRRVIGKAMVTAPHETLLVIDANTGQNALAQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
MFSFWKKRKAEPQPAAEPAPPAAAPEAVQAPVPAPVASPTPAPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVMEQAR
KGWMSRLRSGLSKTSKNLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAESVKTALRDLLV
ELLHPLEKTMVLGRDQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQES
GDPAAVIFDAVNAARARGIDIVMADTAGRLPTQMHLMEELKKVRRVIGKAMVTAPHETLLVIDANTGQNALAQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
Nucleotide
Download Length: 1134 bp
>NTDB_id=1043383 ACEN2Y_RS23550 WP_014618044.1 3147285..3148418(+) (pilA) [Ralstonia solanacearum strain 115-4]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCCGCCGAACCCGCGCCGCCCGCCGCCGCGCCCGAAGC
CGTCCAGGCCCCGGTACCGGCCCCGGTTGCCTCCCCCACCCCTGCCCCTGCACCCGCCCCGGTTGCCGTGCCGGATACGC
CGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTACCGACGCCGCCCGTGATGGAGCAGGCGCGC
AAGGGCTGGATGTCTCGCCTGCGCTCGGGGCTGTCGAAGACCAGCAAGAACCTGACCACGCTGTTCGTCGGCGTGAAGGT
GGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTGGATGCCACCGAATACCTGCTGG
ACGAGCTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGAGCGTGAAGACCGCGCTGCGCGACCTGCTCGTC
GAGCTGCTGCACCCGCTGGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGATGGTGATCATGATCGCGGGCGTCAACGG
TGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAGTCCGTGCTGCTGGCCGCCGGCG
ACACGTTCCGCGCCGCCGCCCGCGAGCAACTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAGTCG
GGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGTGCCCGCGGCATCGACATTGTCATGGCCGACACCGC
CGGCCGCCTGCCGACCCAGATGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCCATGGTGACGG
CGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACGATGCA
CTCGGCCTGACCGGCCTGATCGTCACTAAGCTGGACGGCACCGCCAAAGGTGGCATCCTGGCCGCCATCGCGCGGCAGCG
GCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAACAGGTCGAAGACCTGCAACCGTTCTCCGCGCGCGAATTCGCCGACG
CGCTGCTGGGCTGA
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCCGCCGAACCCGCGCCGCCCGCCGCCGCGCCCGAAGC
CGTCCAGGCCCCGGTACCGGCCCCGGTTGCCTCCCCCACCCCTGCCCCTGCACCCGCCCCGGTTGCCGTGCCGGATACGC
CGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTACCGACGCCGCCCGTGATGGAGCAGGCGCGC
AAGGGCTGGATGTCTCGCCTGCGCTCGGGGCTGTCGAAGACCAGCAAGAACCTGACCACGCTGTTCGTCGGCGTGAAGGT
GGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTGGATGCCACCGAATACCTGCTGG
ACGAGCTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGAGCGTGAAGACCGCGCTGCGCGACCTGCTCGTC
GAGCTGCTGCACCCGCTGGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGATGGTGATCATGATCGCGGGCGTCAACGG
TGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAGTCCGTGCTGCTGGCCGCCGGCG
ACACGTTCCGCGCCGCCGCCCGCGAGCAACTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAGTCG
GGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGTGCCCGCGGCATCGACATTGTCATGGCCGACACCGC
CGGCCGCCTGCCGACCCAGATGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCCATGGTGACGG
CGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACGATGCA
CTCGGCCTGACCGGCCTGATCGTCACTAAGCTGGACGGCACCGCCAAAGGTGGCATCCTGGCCGCCATCGCGCGGCAGCG
GCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAACAGGTCGAAGACCTGCAACCGTTCTCCGCGCGCGAATTCGCCGACG
CGCTGCTGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
51.202 |
100 |
0.565 |