Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ACEN3H_RS16535 Genome accession   NZ_CP168231
Coordinates   3539708..3541936 (+) Length   742 a.a.
NCBI ID   WP_373358120.1    Uniprot ID   -
Organism   Acinetobacter lactucae strain 2024CK-01095     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3534708..3546936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3H_RS16510 (ACEN3H_16510) lnt 3535228..3536787 (+) 1560 WP_373358118.1 apolipoprotein N-acyltransferase -
  ACEN3H_RS16515 (ACEN3H_16515) - 3536789..3537127 (-) 339 WP_016144199.1 tRNA-binding protein -
  ACEN3H_RS16520 (ACEN3H_16520) - 3537272..3537616 (-) 345 WP_373358119.1 hypothetical protein -
  ACEN3H_RS16525 (ACEN3H_16525) gspG 3537884..3538333 (-) 450 WP_171067922.1 type II secretion system major pseudopilin GspG -
  ACEN3H_RS16530 (ACEN3H_16530) gspF 3538354..3539559 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  ACEN3H_RS16535 (ACEN3H_16535) priA 3539708..3541936 (+) 2229 WP_373358120.1 primosomal protein N' Machinery gene
  ACEN3H_RS16540 (ACEN3H_16540) - 3542013..3543857 (+) 1845 WP_031947229.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ACEN3H_RS16545 (ACEN3H_16545) - 3544021..3544896 (+) 876 WP_125699041.1 Hsp33 family molecular chaperone HslO -
  ACEN3H_RS16550 (ACEN3H_16550) - 3545034..3545645 (+) 612 WP_057104864.1 LysE family translocator -
  ACEN3H_RS16555 (ACEN3H_16555) - 3545792..3546748 (+) 957 WP_031947228.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84102.85 Da        Isoelectric Point: 8.5630

>NTDB_id=1043330 ACEN3H_RS16535 WP_373358120.1 3539708..3541936(+) (priA) [Acinetobacter lactucae strain 2024CK-01095]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERARVGSRVAISFGRQNLIGIITEKVNPNESFTGTFQLKDISELL
DDEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVETLLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYYLVESGKLTALQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPEHEVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQVAGEIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=1043330 ACEN3H_RS16535 WP_373358120.1 3539708..3541936(+) (priA) [Acinetobacter lactucae strain 2024CK-01095]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCCCGCGTAGGCTCACGCGTCGCTATTTCATTTGGACGCCAAAACCTGA
TTGGTATCATTACTGAAAAAGTGAACCCAAATGAATCATTTACAGGCACCTTTCAACTTAAAGACATTTCTGAACTTTTA
GATGATGAGCCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCAGCCCAGTATTACCAATTTCCAATTGGTGA
GGTCATGCAAACCGCCCTACCTGCATTATTGCGTCAGGGCAAACCAATGGATGTTTTGTTCCATCTTTGGAAAATTACAC
CATGTGATAATGTTGAAACACTTCTTAAACGCTCGGTAAAGCAACAAGACGCGTATCAAATTTTAAAGTTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTAGA
CTGCACACTTGAACCACACGACTTTAGCCCATCGCCTGTTCAATTGGCACAAATGCCGCTCACACTCAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTCTTGTTAGATGGTTTAACTGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCAGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCGCGTTTTAACTGTGATATTGCTCTATTACACTCGGGCTTAAATGACTCTA
AACGTTTACAAGCATGGCAACAGGCTCAGACTGGCAAAGCATCTATTATTTTAGGCACACGCTCTGCGATTTATACGCCA
CTGCCACGTTTGGGCTTAATCATTTTAGATGAAGAACATGACCTGTCTTATAAACAGCAAGAAGGCTTCCGCTACCATGC
ACGTGATGTCGCACTTTATCGAGGTCACTTGCAAAACTGCCCTGTTATTTTAGGTTCAGCAACTCCAAGCATCGATAGTT
ATTATTTGGTCGAATCTGGCAAGTTAACAGCGCTTCAGCTTAACCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATAGAACAAATTAAAAACACCCTAGCCAG
AAAAGAGCAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTGTGTGAAAGCTGTGGCTGGCAAGCAA
ATTGTCCGCATTGTGATGCACATTTTACTTTGCATACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTGCCAGACCATTGCCCTGAATGTCAGCAAAAAAGCCTAAAAACCTTAGGTGCTGGAACAGCTAAGGTTGAAGA
GCACTTACAAGAATTATTTCCCGAACATGAAGTAATTCGAGTTGACCGTGACAGCACAAGTCGTGTGGGTAGCTGGCAAA
AAATCTATGACCGTATTCATCAAAACAAACCAACAATTTTGCTCGGCACTCAAATGTTGGCAAAAGGTCATCATTTTCCA
CACGTCACCTTAGTTGCTATTTTAGATATTGATGCGGGCTTACTGAGTGTCGATATTCGTGCGCCAGAACGTACTGCGCA
GTTAATTGTACAAGTCGCTGGACGTGCAGGCCGTGGCGAACATAAAGGCCATGTTTACTTACAAACCCTAAGACCAGATC
ACCCTTTACTCACCACACTCATCGAAAAAGATTATCGGGCGGTTGCCAAACAGACACTTGCAGAACGTAAAGTCGCATTG
CTGCCGCCTTATCGCTATGCCGTACTGATACGTGCAGAGTCCAAAGACCGTGACTATACCTTACATTTTTTAAATGAAGC
TGCCGAGCAACTTCGTCAAGTGGCTGGTGAAATTGTTGATATTTGGGGACCTATTCCAGCTCCTATGGAGCGTAAAGCGG
GACGTTACCGCGCACATATGGTGATTTTGTCTGCTGACCGTGCTCGCCTACATTTTTACTTAAGACAATGGTGGTCACAA
TTAGTTCATGCGCCGCGCCAGCATCAACTCAGGCTATCAATTGATGTCGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.035

100

0.97

Multiple sequence alignment