Detailed information NTG0104333

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: R8918_RS05645
• Genome accession: NZ_AP028332
• Coordinates: 1086461..1087420 (+)
• Length: 319 a.a.
• NCBI ID: WP_032586265.1
• Uniprot ID: A0A5Y8BL20
• Organism: Campylobacter jejuni strain BCH-10155
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1081461..1092420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8918_RS05620 (B10155_10980)	neuC	1082054..1083178 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
R8918_RS05625	-	1083171..1084115 (+)	945	Protein_1087	beta-1,4-N-acetylgalactosaminyltransferase	-
R8918_RS05630 (B10155_11010)	-	1084112..1084777 (+)	666	WP_002935341.1	cytidylyltransferase domain-containing protein	-
R8918_RS05635 (B10155_11020)	-	1084901..1085650 (+)	750	WP_061099817.1	CatB-related O-acetyltransferase	-
R8918_RS05640 (B10155_11030)	waaV	1085590..1086402 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
R8918_RS05645 (B10155_11040)	waaF	1086461..1087420 (+)	960	WP_032586265.1	glycosyltransferase family 9 protein	Regulator
R8918_RS05650 (B10155_11050)	gmhA	1087401..1087961 (-)	561	WP_023890815.1	D-sedoheptulose 7-phosphate isomerase	-
R8918_RS05655 (B10155_11060)	rfaE1	1087958..1089343 (-)	1386	WP_032586263.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
R8918_RS05660 (B10155_11070)	rfaD	1089336..1090289 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
R8918_RS05665 (B10155_11080)	gmhB	1090290..1090852 (-)	563	Protein_1095	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
R8918_RS05670 (B10155_11090)	-	1090933..1091235 (+)	303	WP_002852762.1	c-type cytochrome	-
R8918_RS05675 (B10155_11100)	ccoS	1091258..1091464 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.49 Da
• Isoelectric Point: 10.3923

>NTDB_id=104333 R8918_RS05645 WP_032586265.1 1086461..1087420(+) (waaF) [Campylobacter jejuni strain BCH-10155]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=104333 R8918_RS05645 WP_032586265.1 1086461..1087420(+) (waaF) [Campylobacter jejuni strain BCH-10155]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A5Y8BL20

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94