Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACEN3H_RS09675 | Genome accession | NZ_CP168231 |
| Coordinates | 2073523..2073903 (-) | Length | 126 a.a. |
| NCBI ID | WP_031948175.1 | Uniprot ID | - |
| Organism | Acinetobacter lactucae strain 2024CK-01095 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2068523..2078903
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEN3H_RS09645 (ACEN3H_09645) | tadA | 2068644..2069147 (-) | 504 | WP_061875520.1 | tRNA adenosine(34) deaminase TadA | - |
| ACEN3H_RS09650 (ACEN3H_09650) | - | 2069154..2070278 (-) | 1125 | WP_079748353.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACEN3H_RS09655 (ACEN3H_09655) | ung | 2070275..2070988 (-) | 714 | WP_016145102.1 | uracil-DNA glycosylase | - |
| ACEN3H_RS09660 (ACEN3H_09660) | - | 2071042..2071638 (-) | 597 | WP_016145101.1 | 6-carboxytetrahydropterin synthase | - |
| ACEN3H_RS09665 (ACEN3H_09665) | gspK | 2071866..2072825 (-) | 960 | WP_373357540.1 | type II secretion system minor pseudopilin GspK | - |
| ACEN3H_RS09670 (ACEN3H_09670) | xcpW | 2072825..2073523 (-) | 699 | WP_057106322.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACEN3H_RS09675 (ACEN3H_09675) | xcpV | 2073523..2073903 (-) | 381 | WP_031948175.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACEN3H_RS09680 (ACEN3H_09680) | - | 2073893..2074447 (-) | 555 | WP_057106321.1 | type II secretion system protein | - |
| ACEN3H_RS09685 (ACEN3H_09685) | - | 2074454..2075062 (-) | 609 | WP_014206595.1 | TetR/AcrR family transcriptional regulator | - |
| ACEN3H_RS09690 (ACEN3H_09690) | - | 2075099..2075872 (-) | 774 | WP_373357542.1 | TatD family hydrolase | - |
| ACEN3H_RS09695 (ACEN3H_09695) | - | 2075890..2076231 (-) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| ACEN3H_RS09700 (ACEN3H_09700) | - | 2076242..2077222 (-) | 981 | WP_163119588.1 | DNA polymerase III subunit delta' | - |
| ACEN3H_RS09705 (ACEN3H_09705) | kdsB | 2077236..2077997 (-) | 762 | WP_373357543.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=1043318 ACEN3H_RS09675 WP_031948175.1 2073523..2073903(-) (xcpV) [Acinetobacter lactucae strain 2024CK-01095]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKIQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKIQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1043318 ACEN3H_RS09675 WP_031948175.1 2073523..2073903(-) (xcpV) [Acinetobacter lactucae strain 2024CK-01095]
ATGAAATCTAAAGGTTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGCTAACTAA
AGTAGCCATGCAGTACACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTTTAATGGAGATAAATCAGGAGTGGCTTGAAGGTACGCAAAGCAAGCAAGTTACTTCCCAAGGTGAAACTTGGCAGATT
GATAAATCTGCACAATCCACAATTAGCCCGAATGTTCAGAAAGTAGATTTGCAAATTAGCTTATATGATTCTGATAAAGG
GAAAATTCAAAATGGTATTACTCACTTAGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGTTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGCTAACTAA
AGTAGCCATGCAGTACACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTTTAATGGAGATAAATCAGGAGTGGCTTGAAGGTACGCAAAGCAAGCAAGTTACTTCCCAAGGTGAAACTTGGCAGATT
GATAAATCTGCACAATCCACAATTAGCCCGAATGTTCAGAAAGTAGATTTGCAAATTAGCTTATATGATTCTGATAAAGG
GAAAATTCAAAATGGTATTACTCACTTAGTATTTTTTAATTATCCAATGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |