Detailed information    

insolico Bioinformatically predicted

Overview


Name   tonB2   Type   Machinery gene
Locus tag   ACEN3N_RS18740 Genome accession   NZ_CP168228
Coordinates   3983135..3984016 (-) Length   293 a.a.
NCBI ID   WP_004825113.1    Uniprot ID   N8X7E6
Organism   Acinetobacter bereziniae strain 2024CK-01176     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3978135..3989016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3N_RS18710 (ACEN3N_18710) - 3978495..3978869 (-) 375 WP_004825098.1 cytochrome b562 -
  ACEN3N_RS18715 (ACEN3N_18715) coaBC 3979034..3980299 (-) 1266 WP_373350555.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  ACEN3N_RS18720 (ACEN3N_18720) radC 3980402..3981136 (+) 735 WP_034707928.1 DNA repair protein RadC -
  ACEN3N_RS18725 (ACEN3N_18725) - 3981175..3982086 (+) 912 WP_004825105.1 bestrophin family protein -
  ACEN3N_RS18730 (ACEN3N_18730) - 3982185..3982469 (+) 285 WP_004825107.1 antibiotic biosynthesis monooxygenase -
  ACEN3N_RS18735 (ACEN3N_18735) - 3982576..3983058 (+) 483 WP_262773835.1 ankyrin repeat domain-containing protein -
  ACEN3N_RS18740 (ACEN3N_18740) tonB2 3983135..3984016 (-) 882 WP_004825113.1 energy transducer TonB Machinery gene
  ACEN3N_RS18745 (ACEN3N_18745) - 3984247..3984933 (+) 687 WP_004825115.1 hypothetical protein -
  ACEN3N_RS18750 (ACEN3N_18750) - 3985085..3985792 (+) 708 WP_151824360.1 DUF3108 domain-containing protein -
  ACEN3N_RS18755 (ACEN3N_18755) - 3985896..3986471 (+) 576 WP_004825120.1 xanthine phosphoribosyltransferase -
  ACEN3N_RS18760 (ACEN3N_18760) - 3986623..3987486 (+) 864 WP_004825122.1 acyl-CoA thioesterase II -
  ACEN3N_RS18765 (ACEN3N_18765) - 3987719..3988084 (+) 366 WP_004825124.1 hypothetical protein -
  ACEN3N_RS18770 (ACEN3N_18770) wrbA 3988264..3988857 (-) 594 WP_004825125.1 NAD(P)H:quinone oxidoreductase -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33348.89 Da        Isoelectric Point: 8.3470

>NTDB_id=1043282 ACEN3N_RS18740 WP_004825113.1 3983135..3984016(-) (tonB2) [Acinetobacter bereziniae strain 2024CK-01176]
MIKKLFANTQHTGYWWQDALFVGAVSIAVIVHGLFLSVQFGMPQENNTATKEIAVSIRPSEDKVKDADFLAQADQQGSGT
FRKEHRMSSDMPAQAEDKSAGDQQLEALEQIQQKRELKFEEKVLMTVLSWQKQAEQNDRKKAMEELQSQMQAKAAMVASL
EAQYLQKQQNFSKQQKIKTLDGIQAKQDASAGYLDKFREKVEMYGNRYYPDLAKQQRLSGEVRLMVILNNEGGIRAIRLI
ESSGHAILDEAAKNSVRKGAPFGRFDAKMKDISELRIVRTWRFDPAESEFEVH

Nucleotide


Download         Length: 882 bp        

>NTDB_id=1043282 ACEN3N_RS18740 WP_004825113.1 3983135..3984016(-) (tonB2) [Acinetobacter bereziniae strain 2024CK-01176]
ATGATAAAAAAATTATTTGCCAATACGCAACATACTGGGTACTGGTGGCAAGATGCATTATTTGTCGGGGCAGTTTCAAT
TGCTGTAATTGTCCACGGGTTATTTTTATCTGTGCAATTTGGTATGCCGCAAGAAAATAATACTGCGACAAAAGAAATTG
CTGTCAGTATTCGCCCCAGTGAAGATAAAGTCAAAGATGCTGATTTCCTTGCGCAAGCAGATCAACAAGGTTCAGGAACC
TTTCGTAAAGAACATCGGATGTCCTCTGATATGCCAGCACAAGCTGAAGATAAAAGTGCAGGGGATCAACAGCTTGAAGC
TTTAGAGCAAATACAGCAAAAACGTGAATTAAAATTTGAAGAAAAAGTGCTGATGACCGTTTTAAGTTGGCAAAAGCAAG
CTGAACAAAACGATCGAAAAAAGGCAATGGAAGAATTACAAAGCCAAATGCAAGCCAAAGCCGCGATGGTGGCGAGCTTA
GAAGCACAATATTTACAGAAGCAGCAAAATTTTAGTAAACAACAAAAAATTAAAACCTTAGATGGCATTCAAGCGAAACA
AGATGCATCGGCTGGTTATTTGGATAAATTCCGTGAAAAAGTCGAAATGTATGGCAACCGCTATTATCCTGATCTTGCTA
AGCAACAGCGCCTTTCAGGTGAAGTTCGTTTAATGGTGATTCTGAATAATGAAGGGGGAATACGGGCAATTCGTTTAATC
GAAAGTTCAGGTCATGCCATTTTAGATGAAGCTGCTAAAAATTCGGTACGTAAGGGTGCTCCATTTGGACGTTTTGATGC
AAAAATGAAAGATATTTCTGAGCTACGAATTGTCAGAACGTGGCGTTTCGATCCCGCTGAGTCTGAATTTGAAGTCCATT
AG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N8X7E6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

72.109

100

0.724


Multiple sequence alignment