Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ACEN3N_RS03515 Genome accession   NZ_CP168228
Coordinates   733387..737877 (+) Length   1496 a.a.
NCBI ID   WP_373350740.1    Uniprot ID   -
Organism   Acinetobacter bereziniae strain 2024CK-01176     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
ICE 738265..792318 733387..737877 flank 388


Gene organization within MGE regions


Location: 733387..792318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3N_RS03515 (ACEN3N_03515) chpA 733387..737877 (+) 4491 WP_373350740.1 Hpt domain-containing protein Regulator
  ACEN3N_RS03520 (ACEN3N_03520) - 737886..738353 (+) 468 WP_009586246.1 hypothetical protein -
  ACEN3N_RS03525 (ACEN3N_03525) - 739311..741374 (+) 2064 WP_151804557.1 EAL domain-containing protein -
  ACEN3N_RS03530 (ACEN3N_03530) fimA 741772..742308 (+) 537 WP_151807379.1 type 1 fimbrial major subunit FimA -
  ACEN3N_RS03535 (ACEN3N_03535) - 742362..742859 (+) 498 WP_373350741.1 hypothetical protein -
  ACEN3N_RS03540 (ACEN3N_03540) - 742879..743580 (+) 702 WP_151752065.1 fimbria/pilus periplasmic chaperone -
  ACEN3N_RS03545 (ACEN3N_03545) - 743609..746221 (+) 2613 WP_373350742.1 fimbria/pilus outer membrane usher protein -
  ACEN3N_RS03550 (ACEN3N_03550) - 746235..747260 (+) 1026 WP_373350743.1 fimbrial protein -
  ACEN3N_RS03555 (ACEN3N_03555) - 747270..747845 (+) 576 WP_009585769.1 fimbrial protein -
  ACEN3N_RS03560 (ACEN3N_03560) - 748403..749017 (+) 615 WP_004827639.1 MarC family protein -
  ACEN3N_RS03565 (ACEN3N_03565) - 749144..750250 (+) 1107 WP_373350744.1 ImmA/IrrE family metallo-endopeptidase -
  ACEN3N_RS03570 (ACEN3N_03570) - 750243..750749 (+) 507 WP_046761329.1 DUF4411 family protein -
  ACEN3N_RS03575 (ACEN3N_03575) - 750767..751084 (+) 318 Protein_680 Fic family protein -
  ACEN3N_RS03580 (ACEN3N_03580) - 751219..752808 (+) 1590 WP_004827642.1 peptide chain release factor 3 -
  ACEN3N_RS03585 (ACEN3N_03585) - 752931..753716 (+) 786 WP_373351171.1 hypothetical protein -
  ACEN3N_RS03590 (ACEN3N_03590) - 753979..754947 (+) 969 WP_004827646.1 RsiV family protein -
  ACEN3N_RS03595 (ACEN3N_03595) - 754947..755771 (+) 825 WP_151804701.1 TatD family hydrolase -
  ACEN3N_RS03600 (ACEN3N_03600) acnA 755986..758742 (+) 2757 WP_373350745.1 aconitate hydratase AcnA -
  ACEN3N_RS03605 (ACEN3N_03605) - 758876..759646 (+) 771 WP_151712701.1 ThiF family adenylyltransferase -
  ACEN3N_RS03610 (ACEN3N_03610) - 760205..761314 (+) 1110 WP_151807373.1 DUF695 domain-containing protein -
  ACEN3N_RS03615 (ACEN3N_03615) - 761391..761900 (+) 510 WP_151807372.1 hypothetical protein -
  ACEN3N_RS03620 (ACEN3N_03620) - 762078..762215 (-) 138 WP_004827656.1 hypothetical protein -
  ACEN3N_RS03625 (ACEN3N_03625) - 762316..763206 (+) 891 WP_151962029.1 LysR family transcriptional regulator -
  ACEN3N_RS03630 (ACEN3N_03630) dusA 763282..764301 (-) 1020 WP_373350746.1 tRNA dihydrouridine(20/20a) synthase DusA -
  ACEN3N_RS03635 (ACEN3N_03635) xerC 764423..765583 (+) 1161 WP_373350747.1 tyrosine recombinase XerC -
  ACEN3N_RS03640 (ACEN3N_03640) - 765602..765880 (-) 279 WP_212639080.1 pyocin activator PrtN family protein -
  ACEN3N_RS03645 (ACEN3N_03645) - 766189..766890 (-) 702 WP_373350748.1 hypothetical protein -
  ACEN3N_RS03650 (ACEN3N_03650) - 767484..768431 (+) 948 WP_373350749.1 MobA/MobL family protein -
  ACEN3N_RS03655 (ACEN3N_03655) - 768583..769434 (-) 852 WP_373350750.1 hypothetical protein -
  ACEN3N_RS03660 (ACEN3N_03660) - 769421..769765 (-) 345 WP_046760988.1 hypothetical protein -
  ACEN3N_RS03665 (ACEN3N_03665) - 771117..771725 (+) 609 WP_373350751.1 hypothetical protein -
  ACEN3N_RS03670 (ACEN3N_03670) - 771752..773338 (+) 1587 WP_373350752.1 CAP domain-containing protein -
  ACEN3N_RS03675 (ACEN3N_03675) - 773540..773923 (+) 384 WP_373350753.1 hypothetical protein -
  ACEN3N_RS03680 (ACEN3N_03680) - 774007..775146 (+) 1140 WP_373350754.1 DNA methyltransferase -
  ACEN3N_RS03685 (ACEN3N_03685) - 775143..776057 (+) 915 WP_373350755.1 Bpu10I family restriction endonuclease -
  ACEN3N_RS03690 (ACEN3N_03690) - 776071..777159 (+) 1089 WP_373350756.1 DUF262 domain-containing protein -
  ACEN3N_RS03695 (ACEN3N_03695) - 777160..778308 (+) 1149 WP_373350757.1 DUF3696 domain-containing protein -
  ACEN3N_RS03700 (ACEN3N_03700) - 778310..779272 (+) 963 WP_373350758.1 hypothetical protein -
  ACEN3N_RS03705 (ACEN3N_03705) - 779635..780348 (-) 714 WP_373350759.1 hypothetical protein -
  ACEN3N_RS03710 (ACEN3N_03710) - 780345..781982 (-) 1638 WP_373350760.1 RNA-directed DNA polymerase -
  ACEN3N_RS03715 (ACEN3N_03715) - 782744..783301 (+) 558 WP_151962028.1 SMI1/KNR4 family protein -
  ACEN3N_RS03720 (ACEN3N_03720) - 783618..784340 (-) 723 WP_004818986.1 FadR/GntR family transcriptional regulator -
  ACEN3N_RS03725 (ACEN3N_03725) - 784469..785221 (+) 753 WP_373350761.1 SDR family oxidoreductase -
  ACEN3N_RS03730 (ACEN3N_03730) - 785248..786090 (+) 843 WP_373350762.1 fumarylacetoacetate hydrolase family protein -
  ACEN3N_RS03735 (ACEN3N_03735) - 786204..787481 (+) 1278 WP_151751120.1 L-fuconate dehydratase -
  ACEN3N_RS03740 (ACEN3N_03740) - 787717..788541 (+) 825 WP_005031003.1 amidohydrolase -
  ACEN3N_RS03745 (ACEN3N_03745) - 788577..789359 (+) 783 WP_042089556.1 SDR family oxidoreductase -
  ACEN3N_RS03750 (ACEN3N_03750) - 789389..789724 (+) 336 WP_004827678.1 L-rhamnose mutarotase -
  ACEN3N_RS03755 (ACEN3N_03755) fucP 789750..790979 (+) 1230 WP_005030996.1 L-fucose:H+ symporter permease -

Sequence


Protein


Download         Length: 1496 a.a.        Molecular weight: 169253.01 Da        Isoelectric Point: 4.4175

>NTDB_id=1043267 ACEN3N_RS03515 WP_373350740.1 733387..737877(+) (chpA) [Acinetobacter bereziniae strain 2024CK-01176]
MKEILKHLVEHVTLPEDAYLDQDDEILEIFVEELEEIFEQLQASLDQWLNDESKDKELVNVRRYFHTLKGSGRMVGAKRS
GELAWTVEDTLNRVIAKNLELSTEIQQYVSAVFNVYKFKLYAEFLNKQPHHLDLAPLVYLGQQLQQKQSLEPALADLLSL
AHTLKHENVLTGLEIADSEPLVEHIETVAAMANHENAEEHAVADPIQIDESAVETTPTSDESLISETLTIFVEESEEHLA
TIKDFLHLEQHTPEQYNRLIRALHTLRGSSSMAHIQDVFEASGKVEHLFKVLVQEDTESSKNENALLTYYAEFVSDYLHV
LKQTGDQDTQLAQIYQKFNDAWERYDFQHQYQQDHQSQAGLVTQLVDLEIDLLLDAEFEFDKRAQVEYPEYFQQLIQQAQ
ILVDHTDNRASQGIHDFSLALKDGYTQIIAKPDLLNTDYAFEIFSKAHQEFIHLFDTLASGQRVSLSGATQAILDELHDY
VHQEIDVDQIQIAEPSTEPAVQHEAVSDINAVETGNHYVLTQINLDKQNIDSAQSQREFDADVLDIFIEEADELLVGMDH
DLNTWSSHPDDTTALNNLMRYLHTLKGGANMVQATYIGLIAHELETIYERVIKGQLKAGPQVIQSIRLIQDDVADRIQLI
REKSIDYPATHILEVLQHIDQQQFLHDTNVEIAEKAQDEIVLIDESVTPEFDVISVDQQQQATLEQAEPFVEQTQVDDLD
DAERVAQETFIEEARELIDDGLNILNQWFDQRSNRSLLLQLQRIAHSLKGGAKMVKLEGVADIAYELENAFEQFGQHNFN
SNVYDGLLESAFHWLDAAIFKQSYDNFDGLKLNLNHMQYVDVSAQLPEKLSRTNLIFEQTNNEFVQGDGTEPPSMLGEWD
LSEKTETNNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLTDMELAIQRLADQLRRMEGELESQIIAKHGDLS
ARYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQR
LVRQTASAVNKPTELLVNNTEGELDRNILEKLVSPLEHMLRNAIDHGIEDTEQRQKAGKPLTGRIDLNISRQGTDVLVSF
KDDGKGIDPAIIRDKAIEKGLIKSDQHLEPEEILQFIFHPGFSTAQQVTQISGRGVGLDVVQSEIKSLGGQVSVNSELGH
GSTFTIRVPTTVAVSDALMVKVGDQQFAVPLSQIDRIVRISPAALEEYFETQNDYFDIDYQSYKLRYLGEFTANQVTPRL
HGFAHSLPVLLIKGSLGQSVAILVDQLIGSRSQIVVKPIGKQFAAINAIAGATILGDGQVCLILDGQNIARQVQGSSRGG
AEYLQQDKQRHRDQRRLIMIVDDSVTVRKVTSRLLERQGFDVITAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNL
VRHHEIHRDLPIIMITSRTGEKHRERAFSLGVTNYMGKPFQEADLLANIDALLTVK

Nucleotide


Download         Length: 4491 bp        

>NTDB_id=1043267 ACEN3N_RS03515 WP_373350740.1 733387..737877(+) (chpA) [Acinetobacter bereziniae strain 2024CK-01176]
ATGAAAGAAATATTAAAACATTTAGTTGAACACGTCACTTTACCTGAAGATGCTTATCTTGATCAGGATGATGAGATTTT
AGAAATTTTTGTAGAAGAACTTGAAGAAATTTTTGAACAGTTGCAAGCTTCTCTTGATCAATGGCTAAATGATGAGTCCA
AAGATAAGGAATTGGTGAATGTACGTCGCTATTTCCATACCCTTAAAGGCTCTGGACGTATGGTGGGGGCAAAGCGTTCA
GGTGAGTTGGCTTGGACTGTTGAAGATACATTAAATCGTGTAATTGCAAAAAACTTGGAATTAAGTACTGAAATTCAACA
ATATGTCAGTGCTGTATTTAATGTGTATAAGTTCAAATTGTATGCTGAGTTTTTAAATAAACAACCACATCATTTAGATT
TGGCACCATTGGTGTATTTGGGGCAACAATTACAGCAGAAACAGAGTTTAGAACCTGCATTGGCTGATCTACTGTCACTT
GCGCATACCCTCAAGCATGAGAATGTGCTGACGGGTTTAGAAATTGCTGATAGCGAGCCACTTGTAGAGCATATAGAAAC
AGTAGCAGCTATGGCAAACCACGAAAATGCCGAAGAGCATGCAGTGGCAGACCCGATTCAAATTGATGAATCTGCAGTGG
AAACAACGCCGACTTCGGATGAAAGTTTAATCTCTGAAACCCTGACGATTTTTGTTGAAGAGTCGGAAGAACATCTGGCA
ACAATCAAAGACTTTTTGCATTTAGAGCAACATACACCTGAACAATATAATCGCTTGATTCGGGCATTACATACTTTGCG
CGGAAGTTCTTCTATGGCGCATATTCAGGATGTATTTGAAGCAAGTGGTAAAGTTGAGCATTTGTTTAAAGTGTTGGTCC
AAGAAGATACGGAGTCTTCTAAAAATGAAAACGCCTTGTTGACTTATTATGCTGAATTCGTCAGTGATTATCTGCATGTG
CTCAAGCAAACCGGTGATCAAGATACGCAATTAGCCCAGATTTATCAAAAATTTAATGATGCTTGGGAACGTTATGATTT
CCAACATCAATATCAACAAGACCATCAGTCACAAGCAGGTTTAGTGACTCAATTGGTTGATTTGGAAATTGATCTATTGT
TGGATGCTGAATTTGAGTTTGATAAACGCGCTCAAGTTGAATATCCAGAATATTTCCAACAACTGATTCAACAGGCTCAG
ATCCTCGTCGATCATACTGACAATCGTGCGTCACAAGGTATTCATGATTTCAGTCTTGCACTCAAAGACGGATATACACA
GATTATTGCCAAGCCTGATTTGCTGAATACGGATTATGCTTTCGAAATATTCTCTAAAGCACATCAAGAATTCATTCATT
TATTTGATACCTTGGCATCTGGTCAGCGTGTCAGTTTGAGTGGTGCAACTCAGGCGATTTTGGATGAGCTTCATGATTAT
GTACATCAAGAAATTGATGTAGATCAGATTCAAATTGCTGAACCAAGCACTGAGCCAGCAGTTCAACATGAGGCTGTATC
TGATATTAACGCTGTTGAGACAGGTAATCATTATGTCTTAACTCAAATTAATCTCGATAAGCAAAATATAGATTCTGCGC
AAAGTCAGCGTGAGTTTGATGCTGACGTTCTTGATATTTTTATTGAGGAGGCAGATGAGCTATTGGTAGGTATGGATCAT
GACCTAAATACATGGTCAAGTCATCCAGATGATACCACTGCACTCAATAATTTAATGCGCTATTTGCACACTTTAAAAGG
TGGCGCAAATATGGTTCAGGCGACGTATATTGGTTTAATTGCTCATGAACTCGAAACAATTTATGAGCGCGTGATTAAAG
GTCAGCTCAAAGCTGGACCACAAGTTATTCAATCTATTCGTTTGATCCAAGATGATGTCGCAGATCGTATTCAGTTGATT
CGTGAAAAATCTATTGATTATCCAGCAACACACATTCTTGAGGTTTTACAACATATTGATCAACAGCAATTCTTGCATGA
TACGAATGTTGAGATAGCTGAAAAAGCCCAAGATGAGATTGTTTTAATTGACGAGTCTGTTACACCAGAATTTGATGTTA
TTTCTGTTGATCAGCAGCAACAAGCAACGCTTGAACAAGCTGAGCCATTCGTTGAACAGACTCAAGTAGATGACTTGGAT
GACGCCGAACGTGTTGCTCAAGAAACCTTCATTGAGGAAGCTCGTGAGCTGATTGATGATGGGTTAAATATCTTGAATCA
ATGGTTTGATCAACGAAGTAACCGTAGTTTACTACTTCAATTGCAACGTATTGCACATAGCTTAAAAGGCGGTGCAAAAA
TGGTGAAATTGGAAGGTGTTGCGGATATTGCTTATGAGCTTGAAAATGCATTTGAACAATTTGGTCAGCACAACTTTAAT
TCCAATGTGTATGACGGTTTATTGGAAAGTGCTTTTCACTGGTTAGATGCAGCAATTTTCAAACAGAGTTACGATAATTT
TGATGGTTTGAAGTTAAATTTAAACCATATGCAATATGTCGATGTTTCTGCTCAGCTTCCGGAAAAATTATCTCGAACCA
ATTTGATTTTTGAACAGACCAATAATGAGTTTGTTCAAGGAGATGGAACTGAACCACCTTCTATGTTGGGTGAATGGGAT
CTTTCTGAAAAAACTGAAACCAATAATGAGATGATTCGTATCTCTGCGGATTTGGTTGAGAAGATGATCGATCTTTCTGG
TGAAAATGCCATCAACCGTTCGCGTATTGAAATGGATTTGGGTCAATTGGGAAATACATTGACCGATATGGAGCTTGCGA
TTCAACGATTGGCAGATCAGCTTCGTCGAATGGAAGGCGAGTTGGAAAGTCAAATTATTGCTAAACATGGGGATTTAAGT
GCGCGCTATGCGGACTTTGACCCATTGGAAATGGACCAATATTCATCCTTGAATCAATTGTCTAAATCGCTTGCTGAATC
TGCATCCGACTTGGTGGACTTTAAAACCACCTTAGCGGAGAAAATTCGTGATACTGAAGGCTTATTATTGCAACAGTCAC
GTATTCAAGCTGAAATTCAAGAAAGCCTGATGCGTACCCGACTTGTTCCTTTCTCTCGTTTATTACCACGATTACAGCGT
TTGGTACGCCAAACAGCCTCGGCGGTCAATAAGCCTACCGAACTGTTGGTGAATAATACAGAAGGTGAATTAGATCGTAA
TATTTTGGAGAAATTAGTATCTCCATTAGAGCATATGTTGCGTAATGCTATCGACCACGGGATCGAAGATACAGAGCAGC
GACAAAAAGCTGGCAAGCCATTGACTGGTCGAATCGACTTGAATATTAGTCGCCAAGGTACCGATGTTTTGGTGTCCTTT
AAAGATGATGGTAAAGGAATCGATCCTGCAATTATCCGTGATAAAGCCATTGAAAAAGGCTTGATTAAATCAGATCAGCA
TTTAGAACCAGAAGAAATTTTACAATTTATTTTCCATCCTGGTTTTAGTACAGCACAACAAGTCACCCAGATTTCTGGAC
GCGGTGTTGGACTGGATGTGGTTCAAAGTGAAATTAAATCGCTAGGTGGACAGGTCAGTGTAAATTCTGAACTGGGGCAT
GGCTCTACTTTTACCATCCGTGTGCCAACAACAGTTGCTGTGAGTGATGCATTGATGGTGAAAGTCGGTGATCAACAGTT
TGCTGTGCCATTATCGCAAATTGATCGTATTGTGCGAATTTCCCCAGCCGCTCTGGAAGAGTATTTCGAAACTCAAAATG
ACTATTTCGATATAGATTACCAAAGTTATAAATTGCGTTATCTTGGTGAATTTACAGCCAATCAGGTGACGCCACGTTTA
CATGGCTTTGCACATTCATTACCTGTGTTATTGATTAAAGGGAGCTTAGGTCAATCTGTCGCGATTCTGGTTGATCAGTT
AATTGGTTCGCGTTCTCAAATTGTGGTAAAACCGATTGGGAAGCAATTTGCGGCAATTAATGCGATTGCAGGTGCAACGA
TTCTCGGTGATGGTCAAGTTTGTTTGATTCTTGATGGGCAAAATATTGCGCGACAAGTTCAGGGTTCGAGCCGTGGTGGT
GCTGAATATTTACAACAAGATAAACAACGCCATCGCGATCAACGTCGTCTGATTATGATTGTGGATGACTCGGTGACAGT
GCGTAAAGTAACGTCACGTTTATTGGAACGTCAAGGTTTTGATGTGATTACGGCTAAAGACGGTGTTGATGCGATTGAGC
AACTTGAAAATGTCAAACCAGATCTGATGTTGCTCGATATTGAAATGCCACGAATGGATGGATTTGAAGTGACCAATTTG
GTTCGCCATCATGAAATTCATCGTGACTTGCCAATTATTATGATTACCTCACGAACAGGTGAAAAACATCGCGAACGTGC
ATTCAGCTTGGGTGTGACAAACTATATGGGTAAACCATTCCAAGAGGCTGATTTATTAGCCAATATTGATGCTTTGTTGA
CGGTTAAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

59.541

100

0.607


Multiple sequence alignment