Detailed information    

insolico Bioinformatically predicted

Overview


Name   hns   Type   Regulator
Locus tag   ACEN3N_RS01260 Genome accession   NZ_CP168228
Coordinates   273899..274225 (+) Length   108 a.a.
NCBI ID   WP_004826222.1    Uniprot ID   A0A0A8TPZ3
Organism   Acinetobacter bereziniae strain 2024CK-01176     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 268899..279225
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3N_RS01235 (ACEN3N_01235) hemC 269481..270407 (+) 927 WP_171500008.1 hydroxymethylbilane synthase -
  ACEN3N_RS01240 (ACEN3N_01240) - 270418..271200 (+) 783 WP_005035260.1 uroporphyrinogen-III synthase -
  ACEN3N_RS01245 (ACEN3N_01245) - 271197..272030 (+) 834 WP_151962103.1 hypothetical protein -
  ACEN3N_RS01250 (ACEN3N_01250) - 272032..273225 (+) 1194 WP_151962102.1 heme biosynthesis protein HemY -
  ACEN3N_RS01255 (ACEN3N_01255) - 273235..273672 (+) 438 WP_373350664.1 acyl-CoA thioesterase -
  ACEN3N_RS01260 (ACEN3N_01260) hns 273899..274225 (+) 327 WP_004826222.1 H-NS family nucleoid-associated regulatory protein Regulator
  ACEN3N_RS01265 (ACEN3N_01265) gspN 274389..275132 (+) 744 WP_151962101.1 type II secretion system protein N -
  ACEN3N_RS01270 (ACEN3N_01270) - 275132..275983 (+) 852 WP_151962100.1 type II secretion system protein N -
  ACEN3N_RS01275 (ACEN3N_01275) gspD 276025..278274 (+) 2250 WP_151962099.1 type II secretion system secretin GspD -
  ACEN3N_RS01280 (ACEN3N_01280) - 278448..279206 (+) 759 WP_373350665.1 FHA domain-containing protein -

Sequence


Protein


Download         Length: 108 a.a.        Molecular weight: 12354.13 Da        Isoelectric Point: 8.4039

>NTDB_id=1043258 ACEN3N_RS01260 WP_004826222.1 273899..274225(+) (hns) [Acinetobacter bereziniae strain 2024CK-01176]
MMPDISNLSVEELRKLTAEAEALIESKKDQAIEDAYNKIVEIAESAGLSLEQFIEYGAQKRKKTTRKAVEPRYRNKKNTA
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=1043258 ACEN3N_RS01260 WP_004826222.1 273899..274225(+) (hns) [Acinetobacter bereziniae strain 2024CK-01176]
ATGATGCCTGATATTAGTAATTTATCTGTTGAAGAGTTAAGAAAGTTAACAGCTGAAGCTGAAGCTTTAATTGAAAGTAA
AAAAGATCAAGCGATCGAAGATGCTTATAATAAGATTGTTGAAATTGCAGAATCTGCGGGTTTAAGCCTAGAGCAGTTTA
TTGAGTATGGTGCTCAAAAACGTAAAAAGACAACACGTAAAGCTGTTGAGCCACGCTACCGCAATAAGAAAAATACGGCT
GAAACTTGGACGGGTCGTGGTAAGCAACCTCGCTGGTTGGTTGCTGAAATTGAAAAAGGCGCTAAATTAGAAGATTTCTT
GATCTAA

Domains


Predicted by InterproScan.

(12-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0A8TPZ3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

81.481

100

0.815


Multiple sequence alignment