Detailed information
Bioinformatically predicted
Overview
| Name | lrpC | Type | Machinery gene |
| Locus tag | Q433_RS02365 | Genome accession | NZ_CP007409 |
| Coordinates | 464025..464459 (+) | Length | 144 a.a. |
| NCBI ID | WP_003246585.1 | Uniprot ID | A0ABU0V5G7 |
| Organism | Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 459025..469459
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q433_RS02335 (Q433_02485) | ydaD | 459675..460535 (+) | 861 | WP_003234401.1 | SDR family oxidoreductase | - |
| Q433_RS02340 (Q433_02490) | lyxE | 460551..461054 (+) | 504 | WP_021481729.1 | D-lyxose ketol-isomerase | - |
| Q433_RS02345 (Q433_02495) | ydaF | 461140..461691 (+) | 552 | WP_038427389.1 | GNAT family protein | - |
| Q433_RS02350 (Q433_02500) | ydaG | 461769..462191 (+) | 423 | WP_003234396.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| Q433_RS02355 (Q433_02505) | amj | 462697..463506 (+) | 810 | WP_038427391.1 | lipid II flippase Amj | - |
| Q433_RS02360 (Q433_02510) | ydzA | 463550..463840 (-) | 291 | WP_015252794.1 | DUF3817 domain-containing protein | - |
| Q433_RS02365 (Q433_02515) | lrpC | 464025..464459 (+) | 435 | WP_003246585.1 | transcriptional regulator LrpC | Machinery gene |
| Q433_RS02370 (Q433_02520) | topB | 464524..466707 (+) | 2184 | WP_038427393.1 | DNA topoisomerase III | - |
| Q433_RS02375 (Q433_02525) | ephJ | 466908..467996 (+) | 1089 | WP_038427395.1 | hypothetical protein | - |
| Q433_RS02380 (Q433_02530) | epsK | 467977..468828 (+) | 852 | WP_033883717.1 | cyclic-di-GMP receptor EpsK | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 16450.03 Da Isoelectric Point: 7.7037
>NTDB_id=104307 Q433_RS02365 WP_003246585.1 464025..464459(+) (lrpC) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MKLDQIDLNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYTLEVDQKKLGLPVSCIVEATVKNADYER
FKSYIQTLPNIEFCYRIAGAACYMLKINAESLEAVEDFINKTSPYAQTVTHVIFSEIDTKNGRG
MKLDQIDLNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYTLEVDQKKLGLPVSCIVEATVKNADYER
FKSYIQTLPNIEFCYRIAGAACYMLKINAESLEAVEDFINKTSPYAQTVTHVIFSEIDTKNGRG
Nucleotide
Download Length: 435 bp
>NTDB_id=104307 Q433_RS02365 WP_003246585.1 464025..464459(+) (lrpC) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
ATGAAACTTGACCAGATTGATCTGAATATCATTGAGGAGCTGAAGAAGGACAGCCGTTTGTCGATGAGGGAATTAGGCAG
AAAAATTAAGCTGTCGCCTCCATCTGTAACAGAACGGGTAAGACAGCTTGAATCGTTTGGCATCATCAAGCAATACACGC
TGGAGGTCGACCAGAAAAAACTGGGGCTTCCCGTTTCCTGTATTGTGGAAGCAACCGTTAAAAACGCGGATTACGAGCGG
TTCAAAAGCTATATTCAAACATTGCCGAATATTGAATTTTGCTACCGGATTGCGGGTGCAGCCTGCTATATGCTGAAAAT
CAATGCCGAAAGCCTCGAAGCGGTAGAAGATTTCATTAACAAAACATCACCCTACGCGCAAACCGTCACTCACGTCATTT
TCTCAGAAATTGACACGAAAAACGGGCGCGGTTAG
ATGAAACTTGACCAGATTGATCTGAATATCATTGAGGAGCTGAAGAAGGACAGCCGTTTGTCGATGAGGGAATTAGGCAG
AAAAATTAAGCTGTCGCCTCCATCTGTAACAGAACGGGTAAGACAGCTTGAATCGTTTGGCATCATCAAGCAATACACGC
TGGAGGTCGACCAGAAAAAACTGGGGCTTCCCGTTTCCTGTATTGTGGAAGCAACCGTTAAAAACGCGGATTACGAGCGG
TTCAAAAGCTATATTCAAACATTGCCGAATATTGAATTTTGCTACCGGATTGCGGGTGCAGCCTGCTATATGCTGAAAAT
CAATGCCGAAAGCCTCGAAGCGGTAGAAGATTTCATTAACAAAACATCACCCTACGCGCAAACCGTCACTCACGTCATTT
TCTCAGAAATTGACACGAAAAACGGGCGCGGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lrpC | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |