Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   QOR55_RS06875 Genome accession   NZ_OX460911
Coordinates   1336584..1337024 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae isolate MRI Z2-322     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1331584..1342024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR55_RS06860 - 1332242..1332868 (-) 627 WP_000449638.1 GTP pyrophosphokinase -
  QOR55_RS06865 rcrQ 1332976..1334730 (-) 1755 WP_000851086.1 ABC transporter ATP-binding protein Regulator
  QOR55_RS06870 rcrP 1334720..1336537 (-) 1818 WP_000481824.1 ABC transporter ATP-binding protein Regulator
  QOR55_RS06875 rcrR 1336584..1337024 (-) 441 WP_000431168.1 MarR family transcriptional regulator Regulator
  QOR55_RS06880 - 1337292..1339364 (+) 2073 WP_000726925.1 bifunctional metallophosphatase/5'-nucleotidase -
  QOR55_RS06885 - 1339401..1339811 (-) 411 WP_000594937.1 peptide deformylase -
  QOR55_RS06890 gdhA 1339881..1341230 (-) 1350 WP_000200443.1 NADP-specific glutamate dehydrogenase -
  QOR55_RS06895 - 1341398..1341907 (+) 510 WP_000870953.1 DUF308 domain-containing protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=1043050 QOR55_RS06875 WP_000431168.1 1336584..1337024(-) (rcrR) [Streptococcus agalactiae isolate MRI Z2-322]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=1043050 QOR55_RS06875 WP_000431168.1 1336584..1337024(-) (rcrR) [Streptococcus agalactiae isolate MRI Z2-322]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATTTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411