Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8663_RS05310 | Genome accession | NZ_AP028331 |
| Coordinates | 1020499..1020801 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10091 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1015499..1025801
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8663_RS05285 (B10091_10390) | rpsR | 1015861..1016121 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8663_RS05290 (B10091_10400) | lon | 1016182..1018557 (-) | 2376 | WP_002885146.1 | endopeptidase La | - |
| R8663_RS05295 (B10091_10410) | - | 1018574..1019221 (-) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| R8663_RS05300 (B10091_10420) | fliW | 1019382..1019771 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8663_RS05305 (B10091_10430) | proC | 1019771..1020502 (+) | 732 | WP_317675904.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8663_RS05310 (B10091_10440) | ctsT | 1020499..1020801 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8663_RS05315 (B10091_10450) | - | 1020798..1021460 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| R8663_RS05320 (B10091_10460) | - | 1021457..1021909 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8663_RS05325 (B10091_10470) | hemD | 1021906..1022535 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8663_RS05330 (B10091_10480) | thiE | 1022513..1023145 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8663_RS05335 (B10091_10490) | thiD | 1023135..1023947 (-) | 813 | WP_002885404.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8663_RS05340 (B10091_10500) | - | 1023944..1024630 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8663_RS05345 (B10091_10510) | - | 1024627..1025388 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104305 R8663_RS05310 WP_002853046.1 1020499..1020801(+) (ctsT) [Campylobacter jejuni strain BCH-10091]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104305 R8663_RS05310 WP_002853046.1 1020499..1020801(+) (ctsT) [Campylobacter jejuni strain BCH-10091]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |