Detailed information NTG0104296

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: Q433_RS01605
• Genome accession: NZ_CP007409
• Coordinates: 292265..293386 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 287265..298386

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q433_RS01585 (Q433_01690)	ycdA	287270..288334 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
Q433_RS21445	-	288357..288488 (-)	132	WP_003246334.1	hypothetical protein	-
Q433_RS01590 (Q433_01695)	ycdB	288662..290083 (+)	1422	WP_038427323.1	YcdB/YcdC domain-containing protein	-
Q433_RS01595	ycdC	290270..291631 (+)	1362	WP_038428124.1	YcdB/YcdC domain-containing protein	-
Q433_RS01600 (Q433_01710)	cwlK	291639..292142 (-)	504	WP_029317221.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
Q433_RS01605 (Q433_01715)	rapF	292265..293386 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
Q433_RS01610 (Q433_01720)	ycdF	293493..294269 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
Q433_RS01615 (Q433_01725)	ycdG	294294..295979 (+)	1686	WP_038427325.1	alpha-glucosidase	-
Q433_RS01620 (Q433_01730)	znuA	296167..297126 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
Q433_RS01625 (Q433_01735)	znuC	297181..297876 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=104296 Q433_RS01605 WP_015715201.1 292265..293386(+) (rapF) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=104296 Q433_RS01605 WP_015715201.1 292265..293386(+) (rapF) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCAGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405