Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QOR56_RS05780 Genome accession   NZ_OX460906
Coordinates   1124651..1125319 (-) Length   222 a.a.
NCBI ID   WP_000076365.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-265     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1119651..1130319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR56_RS05760 - 1119677..1120450 (+) 774 WP_000622398.1 DUF3307 domain-containing protein -
  QOR56_RS05765 - 1120483..1122144 (-) 1662 WP_000093973.1 peptide ABC transporter substrate-binding protein -
  QOR56_RS05770 xerS 1122603..1123673 (+) 1071 WP_000817924.1 tyrosine recombinase XerS Machinery gene
  QOR56_RS05775 - 1123716..1124654 (-) 939 WP_000620982.1 sensor histidine kinase -
  QOR56_RS05780 braR 1124651..1125319 (-) 669 WP_000076365.1 response regulator transcription factor Regulator
  QOR56_RS05785 - 1125429..1127370 (-) 1942 Protein_1061 FtsX-like permease family protein -
  QOR56_RS05790 - 1127372..1128124 (-) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  QOR56_RS05795 - 1128150..1129111 (-) 962 Protein_1063 S41 family peptidase -
  QOR56_RS05800 - 1129277..1129765 (+) 489 WP_001140791.1 PASTA domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25331.39 Da        Isoelectric Point: 5.3008

>NTDB_id=1042939 QOR56_RS05780 WP_000076365.1 1124651..1125319(-) (braR) [Streptococcus agalactiae isolate MRI Z2-265]
MSQDQGKIYIVEDDMTIVSLLKGHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=1042939 QOR56_RS05780 WP_000076365.1 1124651..1125319(-) (braR) [Streptococcus agalactiae isolate MRI Z2-265]
ATGTCACAAGATCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGGCCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGAG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAGGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCCAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTTGGGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(8-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464