Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABQ014_RS13925 Genome accession   NZ_CP168178
Coordinates   3278114..3278515 (-) Length   133 a.a.
NCBI ID   WP_023904776.1    Uniprot ID   A0AAU0BDV7
Organism   Xanthomonas hortorum pv. hederae strain WHRI 7733A     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3273114..3283515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABQ014_RS13910 (ABQ014_013910) - 3275128..3277164 (-) 2037 WP_023904775.1 methyl-accepting chemotaxis protein -
  ABQ014_RS13915 (ABQ014_013915) - 3277204..3277734 (-) 531 WP_006450736.1 chemotaxis protein CheW -
  ABQ014_RS13920 (ABQ014_013920) - 3277734..3278096 (-) 363 WP_006450735.1 PleD family two-component system response regulator -
  ABQ014_RS13925 (ABQ014_013925) pilG 3278114..3278515 (-) 402 WP_023904776.1 twitching motility response regulator PilG Regulator
  ABQ014_RS13930 (ABQ014_013930) gshB 3278752..3279702 (+) 951 WP_104550414.1 glutathione synthase -
  ABQ014_RS13935 (ABQ014_013935) - 3279699..3280574 (+) 876 WP_104550415.1 energy transducer TonB -
  ABQ014_RS13940 (ABQ014_013940) tsaB 3281141..3281863 (-) 723 WP_104550416.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14690.07 Da        Isoelectric Point: 7.1350

>NTDB_id=1042920 ABQ014_RS13925 WP_023904776.1 3278114..3278515(-) (pilG) [Xanthomonas hortorum pv. hederae strain WHRI 7733A]
MSEHIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1042920 ABQ014_RS13925 WP_023904776.1 3278114..3278515(-) (pilG) [Xanthomonas hortorum pv. hederae strain WHRI 7733A]
ATGAGTGAACACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGACGATTCGAAGACTATTCGCCG
CACCGCCGAAACGCTGCTCAAGCGAGAAGGGTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACTCGTGAAGAACTACTGAGCGCGATTCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment