Detailed information NTG0104280

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: R8565_RS05705
• Genome accession: NZ_AP028330
• Coordinates: 1093733..1094683 (+)
• Length: 316 a.a.
• NCBI ID: WP_209392611.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-10089
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1088733..1099683

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8565_RS05680 (B10089_11170)	neuB	1089232..1090272 (+)	1041	WP_209392606.1	N-acetylneuraminate synthase	-
R8565_RS05685 (B10089_11180)	neuC	1090269..1091387 (+)	1119	WP_209392607.1	UDP-N-acetylglucosamine 2-epimerase	-
R8565_RS05690 (B10089_11190)	-	1091384..1092049 (+)	666	WP_209392608.1	cytidylyltransferase domain-containing protein	-
R8565_RS05695 (B10089_11200)	-	1092037..1092870 (+)	834	WP_209392609.1	CatB-related O-acetyltransferase	-
R8565_RS05700 (B10089_11210)	-	1092862..1093674 (-)	813	WP_209392610.1	glycosyltransferase family 2 protein	-
R8565_RS05705 (B10089_11220)	waaF	1093733..1094683 (+)	951	WP_209392611.1	lipopolysaccharide heptosyltransferase II	Regulator
R8565_RS05710 (B10089_11230)	-	1094669..1095442 (-)	774	WP_209392612.1	glycosyltransferase family 25 protein	-
R8565_RS05715 (B10089_11240)	gmhA	1095442..1096002 (-)	561	WP_209392613.1	D-sedoheptulose 7-phosphate isomerase	-
R8565_RS05720 (B10089_11250)	rfaE1	1095999..1097384 (-)	1386	WP_209392614.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
R8565_RS05725 (B10089_11260)	rfaD	1097377..1098330 (-)	954	WP_209392615.1	ADP-glyceromanno-heptose 6-epimerase	-
R8565_RS05730 (B10089_11270)	gmhB	1098331..1098891 (-)	561	WP_209392616.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
R8565_RS05735 (B10089_11280)	-	1098973..1099275 (+)	303	WP_002852762.1	c-type cytochrome	-
R8565_RS05740 (B10089_11290)	ccoS	1099298..1099504 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36279.91 Da
• Isoelectric Point: 10.3523

>NTDB_id=104280 R8565_RS05705 WP_209392611.1 1093733..1094683(+) (waaF) [Campylobacter jejuni strain BCH-10089]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=104280 R8565_RS05705 WP_209392611.1 1093733..1094683(+) (waaF) [Campylobacter jejuni strain BCH-10089]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCATAAATGCATGAAAGATTTAAAGCCTGAAGTGATTTTAAAAGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.268	99.367	0.937