Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8565_RS05370 | Genome accession | NZ_AP028330 |
| Coordinates | 1026185..1026487 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10089 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1021185..1031487
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8565_RS05345 (B10089_10490) | rpsR | 1021548..1021808 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8565_RS05350 (B10089_10500) | lon | 1021868..1024243 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| R8565_RS05355 (B10089_10510) | - | 1024260..1024907 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R8565_RS05360 (B10089_10520) | fliW | 1025068..1025457 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8565_RS05365 (B10089_10530) | proC | 1025457..1026188 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8565_RS05370 (B10089_10540) | ctsT | 1026185..1026487 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8565_RS05375 (B10089_10550) | - | 1026484..1027146 (+) | 663 | WP_209392600.1 | hypothetical protein | - |
| R8565_RS05380 (B10089_10560) | - | 1027143..1027595 (+) | 453 | WP_011989916.1 | hypothetical protein | - |
| R8565_RS05385 (B10089_10570) | hemD | 1027592..1028221 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8565_RS05390 (B10089_10580) | thiE | 1028199..1028831 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8565_RS05395 (B10089_10590) | thiD | 1028821..1029633 (-) | 813 | WP_038816794.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8565_RS05400 (B10089_10600) | - | 1029630..1030316 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8565_RS05405 (B10089_10610) | - | 1030313..1031074 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104278 R8565_RS05370 WP_002853046.1 1026185..1026487(+) (ctsT) [Campylobacter jejuni strain BCH-10089]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104278 R8565_RS05370 WP_002853046.1 1026185..1026487(+) (ctsT) [Campylobacter jejuni strain BCH-10089]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |