Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   ACBZ92_RS17085 Genome accession   NZ_CP168146
Coordinates   3183106..3184056 (-) Length   316 a.a.
NCBI ID   WP_071272956.1    Uniprot ID   -
Organism   Priestia aryabhattai strain JSH01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3178106..3189056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACBZ92_RS17055 (ACBZ92_17055) - 3178546..3178800 (+) 255 WP_071272965.1 hypothetical protein -
  ACBZ92_RS17060 (ACBZ92_17060) - 3178861..3179001 (-) 141 WP_169746700.1 hypothetical protein -
  ACBZ92_RS17065 (ACBZ92_17065) - 3179255..3180109 (-) 855 WP_071272962.1 manganese catalase family protein -
  ACBZ92_RS17070 (ACBZ92_17070) - 3180437..3181390 (-) 954 WP_221777880.1 siderophore ABC transporter substrate-binding protein -
  ACBZ92_RS17075 (ACBZ92_17075) - 3181414..3182172 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  ACBZ92_RS17080 (ACBZ92_17080) - 3182166..3183113 (-) 948 WP_221777881.1 iron chelate uptake ABC transporter family permease subunit -
  ACBZ92_RS17085 (ACBZ92_17085) ceuB 3183106..3184056 (-) 951 WP_071272956.1 ABC transporter permease Machinery gene
  ACBZ92_RS17090 (ACBZ92_17090) - 3184315..3185121 (-) 807 WP_221777882.1 cell wall hydrolase -
  ACBZ92_RS17095 (ACBZ92_17095) - 3185484..3185738 (+) 255 WP_013057893.1 hypothetical protein -
  ACBZ92_RS17100 (ACBZ92_17100) - 3185820..3185984 (-) 165 WP_162871488.1 hypothetical protein -
  ACBZ92_RS17105 (ACBZ92_17105) - 3186316..3186879 (-) 564 WP_221777883.1 NAD(P)H-dependent oxidoreductase -
  ACBZ92_RS17110 (ACBZ92_17110) lepB 3187171..3187731 (-) 561 WP_071272950.1 signal peptidase I -
  ACBZ92_RS17115 (ACBZ92_17115) - 3187815..3188177 (-) 363 WP_224357833.1 DUF4440 domain-containing protein -
  ACBZ92_RS17120 (ACBZ92_17120) - 3188285..3188830 (-) 546 WP_071272947.1 hypothetical protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 35023.29 Da        Isoelectric Point: 9.9188

>NTDB_id=1042547 ACBZ92_RS17085 WP_071272956.1 3183106..3184056(-) (ceuB) [Priestia aryabhattai strain JSH01]
MKFYQLILVFAVLSVLSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1042547 ACBZ92_RS17085 WP_071272956.1 3183106..3184056(-) (ceuB) [Priestia aryabhattai strain JSH01]
TTGAAGTTTTATCAGTTAATTCTCGTGTTTGCTGTACTATCGGTTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACCAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGTAATAAGTTTGTATCTCCAACAACCGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTGCTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTTATTTTCTCACTCGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTGGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGAGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
ACTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCACTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGCTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5


Multiple sequence alignment