Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AB9L16_RS24300 Genome accession   NZ_CP168138
Coordinates   5363900..5364304 (-) Length   134 a.a.
NCBI ID   WP_016772743.1    Uniprot ID   A0AAU7ESX1
Organism   Pseudomonas sp. LW8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5358900..5369304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB9L16_RS24285 (AB9L16_24285) - 5360667..5362715 (-) 2049 WP_041476807.1 methyl-accepting chemotaxis protein -
  AB9L16_RS24290 (AB9L16_24290) - 5362924..5363463 (-) 540 WP_016772745.1 chemotaxis protein CheW -
  AB9L16_RS24295 (AB9L16_24295) pilH 5363474..5363839 (-) 366 WP_016772744.1 twitching motility response regulator PilH -
  AB9L16_RS24300 (AB9L16_24300) pilG 5363900..5364304 (-) 405 WP_016772743.1 twitching motility response regulator PilG Regulator
  AB9L16_RS24305 (AB9L16_24305) gshB 5364530..5365501 (+) 972 WP_056786399.1 glutathione synthase -
  AB9L16_RS24310 (AB9L16_24310) - 5365609..5366508 (+) 900 WP_039757551.1 energy transducer TonB -
  AB9L16_RS24315 (AB9L16_24315) - 5366644..5367216 (+) 573 WP_016772739.1 YqgE/AlgH family protein -
  AB9L16_RS24320 (AB9L16_24320) ruvX 5367216..5367653 (+) 438 WP_041476809.1 Holliday junction resolvase RuvX -
  AB9L16_RS24325 (AB9L16_24325) pyrR 5367735..5368241 (+) 507 WP_016772737.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AB9L16_RS24330 (AB9L16_24330) - 5368269..5369273 (+) 1005 WP_016772736.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14616.03 Da        Isoelectric Point: 7.2443

>NTDB_id=1042514 AB9L16_RS24300 WP_016772743.1 5363900..5364304(-) (pilG) [Pseudomonas sp. LW8]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1042514 AB9L16_RS24300 WP_016772743.1 5363900..5364304(-) (pilG) [Pseudomonas sp. LW8]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGCCGCACCGCCGAAACATTGTT
GAAGAATGTCGGTTGCGAAGTGATCACCGCCATCGACGGTTTCGATGCGCTGGCGAAGATTGCCGACCACCATCCCGGGA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCCTTCAAG
GCGACGCCGGTGATCATGCTGTCGTCCAGGGACGGTCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGCTCTGATCAATT
TCTGACCAAGCCGTTCAGCAAAGAAGAACTGCTCAACGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701

Multiple sequence alignment