Detailed information NTG1042474

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: ACDZ29_RS11095
• Genome accession: NZ_CP168135
• Coordinates: 2172101..2173489 (+)
• Length: 462 a.a.
• NCBI ID: WP_375090841.1
• Uniprot ID: -
• Organism: Peribacillus sp. RS7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2167101..2178489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDZ29_RS11075 (ACDZ29_10985)	-	2167228..2167689 (+)	462	WP_289318627.1	CtsR family transcriptional regulator	-
ACDZ29_RS11080 (ACDZ29_10990)	-	2167711..2168262 (+)	552	WP_375090839.1	hypothetical protein	-
ACDZ29_RS11085 (ACDZ29_10995)	-	2168259..2169335 (+)	1077	WP_375090840.1	protein arginine kinase	-
ACDZ29_RS11090 (ACDZ29_11000)	clpC	2169459..2171900 (+)	2442	WP_289323316.1	ATP-dependent protease ATP-binding subunit ClpC	-
ACDZ29_RS11095 (ACDZ29_11005)	radA	2172101..2173489 (+)	1389	WP_375090841.1	DNA repair protein RadA	Machinery gene
ACDZ29_RS11100 (ACDZ29_11010)	disA	2173492..2174565 (+)	1074	WP_289318632.1	DNA integrity scanning diadenylate cyclase DisA	-
ACDZ29_RS11105 (ACDZ29_11015)	-	2174792..2175871 (+)	1080	WP_289323318.1	PIN/TRAM domain-containing protein	-
ACDZ29_RS11110 (ACDZ29_11020)	ispD	2175893..2176582 (+)	690	WP_375090842.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
ACDZ29_RS11115 (ACDZ29_11025)	ispF	2176597..2177076 (+)	480	WP_095395284.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 50147.71 Da
• Isoelectric Point: 7.7161

>NTDB_id=1042474 ACDZ29_RS11095 WP_375090841.1 2172101..2173489(+) (radA) [Peribacillus sp. RS7]
MAVKKKTKFMCQSCGYESAKWMGKCPGCGEWNKMVEETEIVKPARKGAFTHSEVSGSGEREKAAPITTIQSEKEPRIKTD
LMELNRALGGGIVQGSLVLIGGDPGIGKSTLLLQVSSQLAHKQKKVLYISGEESVKQTKLRADRLGTMSENLFVYAETDM
DYIQQAITEVKPDLVIIDSIQTVYHSEVTSAPGSVSQVRECTASLMRIAKTNGIAIFIVGHVTKEGAIAGPRLLEHMVDT
VLYFEGERHHTYRIIRAVKNRFGSTNEMGIFEMKEHGLEEVANPSEIFLEERSQGASGSTVVASMEGTRPVLVEIQALIS
PTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAVAISIASSFRDKPTNPTDCIIGE
VGLTGEVRRVSRIEQRVQEAAKLGFERVIIPANNIGGWTAPKGIKIVGVSSVSEALQQSLGG

Nucleotide

• Length: 1389 bp

>NTDB_id=1042474 ACDZ29_RS11095 WP_375090841.1 2172101..2173489(+) (radA) [Peribacillus sp. RS7]
ATGGCTGTAAAGAAGAAAACCAAATTTATGTGTCAGTCTTGTGGATATGAATCCGCGAAATGGATGGGGAAATGCCCAGG
TTGCGGTGAATGGAACAAAATGGTCGAGGAAACTGAAATCGTTAAACCTGCTAGAAAAGGTGCTTTTACCCATTCCGAGG
TTAGTGGTTCCGGGGAAAGGGAAAAGGCAGCGCCCATAACTACTATTCAATCAGAAAAAGAACCACGGATTAAGACGGAT
TTAATGGAATTGAATCGTGCTCTTGGGGGCGGGATCGTACAGGGGTCACTTGTATTGATCGGAGGCGATCCGGGTATAGG
TAAATCGACTCTACTTTTGCAGGTATCCTCCCAATTGGCACATAAACAGAAAAAAGTGCTTTATATATCAGGTGAAGAGT
CAGTCAAGCAAACCAAATTGAGAGCGGACCGGCTTGGGACCATGTCAGAAAATCTATTCGTCTATGCTGAAACCGATATG
GACTATATCCAACAGGCGATTACAGAGGTAAAACCGGATTTGGTCATTATTGACTCCATTCAAACGGTGTACCATTCGGA
GGTTACATCTGCCCCGGGAAGCGTTTCACAAGTTAGGGAATGCACAGCCTCACTCATGCGCATTGCTAAAACGAATGGGA
TTGCGATCTTTATCGTCGGACACGTTACAAAAGAAGGGGCCATTGCAGGGCCACGGCTGCTTGAGCATATGGTAGACACC
GTTTTATATTTCGAAGGTGAAAGACACCATACATATCGAATCATACGTGCTGTCAAAAACCGATTTGGTTCGACGAATGA
GATGGGTATATTTGAAATGAAAGAACATGGTTTGGAAGAGGTCGCGAATCCATCGGAAATTTTCCTTGAAGAACGGTCTC
AAGGAGCTTCGGGTTCCACAGTAGTCGCATCCATGGAAGGAACAAGGCCGGTGCTTGTTGAAATTCAAGCATTGATTTCA
CCTACTAGTTTTGGCAATCCAAGGCGAATGGCCACAGGGATAGACCACAATCGAGTTTCGCTCTTAATGGCTGTTCTGGA
AAAGAGAGTGGGCTTGCTGCTCCAAAACCAAGATGCGTATTTAAAGGTTGCTGGTGGTGTCAAGCTGGATGAACCGGCAA
TTGATCTCGCCGTCGCAATCAGCATTGCCTCTAGTTTCCGTGATAAACCAACAAACCCTACCGATTGCATCATTGGTGAA
GTGGGGCTGACTGGGGAGGTAAGAAGAGTGTCAAGAATTGAACAAAGGGTGCAAGAAGCAGCAAAACTAGGGTTTGAGCG
GGTGATCATACCGGCTAATAATATAGGGGGATGGACCGCGCCAAAAGGTATTAAGATCGTTGGTGTTTCATCGGTCTCGG
AGGCTCTTCAACAATCGTTAGGGGGGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (77-226)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

• Subunit ChlI of Mg-chelatase (ChlI) (369-434)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	77.174	99.567	0.768
radA	Streptococcus mitis NCTC 12261	61.978	98.485	0.61
radA	Streptococcus pneumoniae Rx1	61.978	98.485	0.61
radA	Streptococcus pneumoniae D39	61.978	98.485	0.61
radA	Streptococcus pneumoniae R6	61.978	98.485	0.61
radA	Streptococcus pneumoniae TIGR4	61.978	98.485	0.61
radA	Streptococcus mitis SK321	61.758	98.485	0.608