Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   AB9L17_RS10555 Genome accession   NZ_CP168124
Coordinates   2090548..2092311 (+) Length   587 a.a.
NCBI ID   WP_375200571.1    Uniprot ID   -
Organism   Bacillus sp. RS11     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2085548..2097311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB9L17_RS10525 (AB9L17_10525) - 2085672..2086061 (+) 390 WP_068985504.1 hypothetical protein -
  AB9L17_RS10530 (AB9L17_10530) - 2086153..2086773 (+) 621 WP_375200781.1 NAD(P)-dependent oxidoreductase -
  AB9L17_RS10535 (AB9L17_10535) - 2087337..2088050 (-) 714 WP_375200568.1 hypothetical protein -
  AB9L17_RS10540 (AB9L17_10540) - 2088264..2088485 (-) 222 WP_068985502.1 hypothetical protein -
  AB9L17_RS10545 (AB9L17_10545) - 2088797..2089372 (+) 576 WP_375200569.1 phosphoglycerate mutase family protein -
  AB9L17_RS10550 (AB9L17_10550) - 2090034..2090477 (+) 444 WP_375200570.1 MarR family winged helix-turn-helix transcriptional regulator -
  AB9L17_RS10555 (AB9L17_10555) rcrP 2090548..2092311 (+) 1764 WP_375200571.1 ABC transporter ATP-binding protein Regulator
  AB9L17_RS10560 (AB9L17_10560) rcrQ 2092304..2094130 (+) 1827 WP_375200572.1 ABC transporter ATP-binding protein Regulator
  AB9L17_RS10565 (AB9L17_10565) - 2094563..2096746 (+) 2184 WP_375200573.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64548.06 Da        Isoelectric Point: 8.3020

>NTDB_id=1042417 AB9L17_RS10555 WP_375200571.1 2090548..2092311(+) (rcrP) [Bacillus sp. RS11]
MLKIFKYLKPKEWTLIVASIVFIVGQVWLDLKLPDYMSKITTLVQTEGSKTSEIWSAGGKMLLCALGSMILAVIVGYFAA
KVATSLSKELRKGVFDKTLSFSMEEINGFSIASLITRSTNDITQIQQTVAMGLQVMIKAPILATWAILKIMGKSWEWSAA
TGVAVIVLLILIGNLIIFVLPKFKVVQKLTDNLNRVTREGLTGIRVVHAYNAQGYQEEKFEQVNKNLTDTNLFVNRLMAL
MQPGMGLIMSGLTLAIYWIGAHVINNAAGMDRIGKFSDMVVFSSYAMQVVMAFMLLSMTFILLPRAAVSAARINEVLNTP
QTIIDGVIKSSPKGIEGEIELRNVSFKYPDAEDYVLKDISFTAHKGETVAFIGSTGSGKSTLINLIPRFYDATEGEVLVD
GINVKEYAQESLYNKLGYVSQKAVLFSGTVKSNVAYGENGQIPSTDEGIKKAVEIAQGKEFVETMEGEYEAAIAQGGTNL
SGGQKQRISIARAVNRNPEIFIFDDSFSALDYKTDRQLRSTLKKETKGATSLIVAQRIGTIKDADKIIVLDEGKIVGMGK
HSELLKTCNTYQEIAYSQLSKEELEND

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=1042417 AB9L17_RS10555 WP_375200571.1 2090548..2092311(+) (rcrP) [Bacillus sp. RS11]
ATGTTGAAAATATTTAAATACTTAAAACCAAAAGAATGGACGTTAATCGTTGCCAGCATTGTGTTCATTGTAGGGCAAGT
TTGGCTAGATTTGAAGTTGCCGGATTATATGTCTAAAATTACGACACTTGTCCAAACAGAGGGCAGTAAAACGAGCGAGA
TATGGTCAGCTGGAGGGAAGATGCTTTTATGTGCCCTTGGCAGTATGATATTGGCTGTCATTGTTGGTTATTTTGCGGCA
AAGGTAGCAACGTCTCTTTCAAAGGAATTGCGAAAAGGAGTATTTGACAAAACTTTATCTTTCTCTATGGAGGAGATTAA
TGGTTTTTCAATCGCAAGTCTTATTACTCGTTCTACAAATGATATTACGCAAATACAGCAAACCGTTGCAATGGGTCTTC
AAGTTATGATCAAGGCTCCTATCCTTGCAACGTGGGCTATTTTGAAGATTATGGGGAAAAGTTGGGAGTGGTCAGCGGCA
ACAGGAGTAGCTGTCATTGTTTTACTTATTTTGATAGGTAACCTAATCATCTTTGTGCTACCGAAATTTAAAGTCGTTCA
AAAACTGACAGATAATCTTAACCGAGTAACAAGAGAAGGTTTAACTGGTATTCGTGTTGTTCATGCTTATAACGCACAAG
GGTATCAGGAAGAAAAATTTGAACAAGTAAATAAAAACTTAACAGATACAAACCTTTTTGTGAACCGCCTTATGGCCCTT
ATGCAGCCGGGGATGGGTCTGATTATGTCAGGTTTAACTCTTGCAATCTATTGGATTGGAGCGCATGTAATTAATAATGC
AGCGGGTATGGACAGAATCGGTAAGTTTAGTGATATGGTCGTATTTTCATCTTATGCAATGCAGGTAGTTATGGCATTTA
TGCTATTATCAATGACATTCATTTTGCTACCGAGAGCAGCAGTATCTGCAGCACGTATTAATGAAGTACTAAATACACCT
CAGACAATTATTGATGGAGTCATAAAATCGTCGCCTAAAGGAATCGAAGGTGAAATCGAACTACGTAATGTTAGTTTTAA
ATATCCTGATGCAGAAGACTATGTTTTAAAGGATATTAGTTTTACAGCACATAAAGGCGAAACTGTTGCTTTTATCGGTT
CTACGGGTAGTGGTAAGAGTACGTTAATTAATTTAATCCCAAGATTTTACGATGCTACGGAGGGAGAGGTATTAGTCGAC
GGTATTAATGTAAAAGAATATGCACAAGAATCTCTTTATAATAAGCTGGGCTACGTTTCTCAAAAAGCTGTATTATTTTC
AGGTACGGTAAAATCTAATGTTGCCTACGGTGAAAACGGCCAGATCCCTTCAACAGATGAAGGAATCAAAAAAGCAGTGG
AAATTGCCCAAGGTAAGGAATTTGTGGAGACAATGGAAGGCGAATATGAAGCGGCGATCGCCCAAGGTGGTACAAATCTT
TCGGGAGGACAGAAACAGCGTATTTCGATTGCAAGGGCAGTTAATAGAAATCCTGAAATCTTTATTTTTGATGATTCGTT
CTCTGCCTTAGATTATAAAACGGACCGTCAACTTCGTTCTACATTGAAAAAAGAGACAAAAGGTGCAACCTCTTTAATAG
TGGCACAGCGAATTGGAACAATTAAAGATGCTGATAAAATTATTGTTCTTGATGAAGGTAAAATTGTTGGTATGGGAAAA
CATAGTGAATTATTGAAAACTTGTAACACTTATCAGGAAATTGCTTATTCGCAGCTATCGAAGGAGGAGTTGGAAAATGA
CTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-293)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

55.686

100

0.567

Multiple sequence alignment