Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACDI51_RS13935 Genome accession   NZ_CP168099
Coordinates   2871025..2871621 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain LA19     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2866025..2876621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACDI51_RS13915 (ACDI51_13925) - 2866217..2867974 (-) 1758 WP_020804925.1 Lon protease family protein -
  ACDI51_RS13920 (ACDI51_13930) matP 2868160..2868612 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACDI51_RS13925 (ACDI51_13935) ompA 2868744..2869814 (-) 1071 WP_002898408.1 porin OmpA -
  ACDI51_RS13930 (ACDI51_13940) sulA 2870167..2870676 (-) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  ACDI51_RS13935 (ACDI51_13945) sxy/tfoX 2871025..2871621 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ACDI51_RS13940 (ACDI51_13950) yccS 2871635..2873770 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACDI51_RS13945 (ACDI51_13955) - 2873788..2874234 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ACDI51_RS13950 (ACDI51_13960) helD 2874359..2876413 (+) 2055 WP_004176653.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=1042169 ACDI51_RS13935 WP_004179217.1 2871025..2871621(+) (sxy/tfoX) [Klebsiella pneumoniae strain LA19]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1042169 ACDI51_RS13935 WP_004179217.1 2871025..2871621(+) (sxy/tfoX) [Klebsiella pneumoniae strain LA19]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment