Detailed information NTG1042011

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: QOR53_RS05900
• Genome accession: NZ_OX437061
• Coordinates: 1119224..1120183 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1114224..1125183

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR53_RS05880	neuC	1114793..1115908 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
QOR53_RS09360	-	1115905..1116819 (+)	915	Protein_1142	beta-1,4-N-acetylgalactosaminyltransferase	-
QOR53_RS09365	-	1116853..1117515 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
QOR53_RS05890	-	1117510..1118357 (-)	848	Protein_1144	glycosyltransferase	-
QOR53_RS05895	waaV	1118341..1119165 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
QOR53_RS05900	waaF	1119224..1120183 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
QOR53_RS05905	gmhA	1120164..1120724 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
QOR53_RS05910	rfaE1	1120721..1122106 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
QOR53_RS05915	rfaD	1122099..1123052 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
QOR53_RS05920	gmhB	1123053..1123613 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
QOR53_RS05925	-	1123695..1123997 (+)	303	WP_002852762.1	cytochrome c	-
QOR53_RS05930	ccoS	1124020..1124226 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=1042011 QOR53_RS05900 WP_002875425.1 1119224..1120183(+) (waaF) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1042011 QOR53_RS05900 WP_002875425.1 1119224..1120183(+) (waaF) [Campylobacter jejuni strain ST-19 isolate Campylobacter jejuni]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1