Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   J6K54_RS10230 Genome accession   NZ_CP168075
Coordinates   2105452..2106408 (+) Length   318 a.a.
NCBI ID   WP_018670053.1    Uniprot ID   A0A0F7EIC4
Organism   Brevibacillus laterosporus strain SN19-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2100452..2111408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J6K54_RS10215 (J6K54_10215) - 2101310..2102296 (-) 987 WP_119733418.1 hypothetical protein -
  J6K54_RS10220 (J6K54_10220) - 2102516..2103700 (+) 1185 WP_018670055.1 pyridoxal phosphate-dependent aminotransferase -
  J6K54_RS10225 (J6K54_10225) asnS 2103813..2105105 (+) 1293 WP_018670054.1 asparagine--tRNA ligase -
  J6K54_RS10230 (J6K54_10230) ceuB 2105452..2106408 (+) 957 WP_018670053.1 ABC transporter permease Machinery gene
  J6K54_RS10235 (J6K54_10235) - 2106395..2107351 (+) 957 WP_018670052.1 iron chelate uptake ABC transporter family permease subunit -
  J6K54_RS10240 (J6K54_10240) - 2107345..2108103 (+) 759 WP_018670051.1 ABC transporter ATP-binding protein -
  J6K54_RS10245 (J6K54_10245) - 2108508..2109473 (+) 966 WP_168377232.1 siderophore ABC transporter substrate-binding protein -
  J6K54_RS10250 (J6K54_10250) - 2109648..2110382 (+) 735 WP_018670049.1 DnaD domain-containing protein -
  J6K54_RS10255 (J6K54_10255) - 2110641..2111081 (+) 441 WP_018670048.1 hypothetical protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35333.90 Da        Isoelectric Point: 9.8363

>NTDB_id=1041915 J6K54_RS10230 WP_018670053.1 2105452..2106408(+) (ceuB) [Brevibacillus laterosporus strain SN19-1]
MKKRYLFLALIILSMCSLFIGVKNITPLDILNFNDEQVEIFLISRVPRLVSIIVAGISLSICGLIMQQITRNKFVSPTTA
GTMDCARLGVLVSLMLFTTESPIVKMIVAFIFALGGTFIFMKILKKIKFKDNIFIPLVGIMFGNIISSISTFFAYKYDLI
QNISSWLQGDFSMIMKGRYELLYISIPLVIIAFLYANKFTVAGMGEEFAVNLGLNYQRVINIGLIIVAMISSLVLLTVGM
IPFLGLIIPNIVSIYRGDNLRNSLPHTALLGAVFVLACDILGRIVIFPYELSIGLMVGVIGSGIFLYLLMRRNAYATM

Nucleotide


Download         Length: 957 bp        

>NTDB_id=1041915 J6K54_RS10230 WP_018670053.1 2105452..2106408(+) (ceuB) [Brevibacillus laterosporus strain SN19-1]
ATGAAAAAGAGATATTTATTTTTAGCATTAATCATCCTATCCATGTGCTCCTTATTTATTGGAGTCAAAAACATTACTCC
ACTTGACATTCTAAATTTTAATGATGAGCAAGTTGAAATTTTCTTAATCAGCCGTGTTCCACGATTAGTTAGCATTATTG
TGGCTGGGATTAGCCTTAGTATCTGTGGCTTAATCATGCAGCAGATCACCCGTAATAAATTCGTATCTCCTACTACTGCT
GGAACGATGGACTGCGCTCGATTAGGAGTGCTGGTATCACTCATGCTATTTACTACAGAGAGTCCGATTGTAAAGATGAT
TGTCGCATTTATTTTTGCCTTAGGCGGCACCTTTATTTTTATGAAAATCCTTAAAAAAATAAAGTTCAAAGACAATATCT
TTATTCCATTGGTAGGTATCATGTTTGGTAATATTATCAGTTCTATAAGCACTTTCTTTGCTTATAAATATGACCTGATA
CAAAATATATCCTCATGGTTACAAGGAGACTTCTCCATGATCATGAAGGGAAGATATGAGCTTTTGTATATTAGTATCCC
GCTTGTCATTATCGCCTTTCTTTATGCGAATAAATTCACGGTCGCAGGAATGGGAGAAGAATTCGCGGTTAATCTAGGAC
TCAACTATCAGCGTGTGATCAATATCGGATTAATCATCGTTGCTATGATTTCCTCTCTGGTATTGCTCACAGTCGGAATG
ATTCCATTCCTTGGTTTAATTATTCCTAACATCGTTTCCATTTATCGTGGGGATAATCTACGGAACAGTCTACCGCATAC
AGCCTTACTCGGAGCCGTATTTGTCCTAGCATGTGATATATTAGGGCGTATCGTAATTTTTCCTTATGAGCTCTCGATTG
GACTTATGGTCGGAGTTATCGGCAGTGGAATCTTCCTGTACTTACTCATGAGGAGAAATGCATATGCAACAATGTAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0F7EIC4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

57.655

96.541

0.557

Multiple sequence alignment