Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACDJ60_RS08445 Genome accession   NZ_CP168055
Coordinates   1773206..1773802 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain LA111     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1768206..1778802
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACDJ60_RS08425 (ACDJ60_08425) - 1768398..1770155 (-) 1758 WP_004147851.1 Lon protease family protein -
  ACDJ60_RS08430 (ACDJ60_08430) matP 1770341..1770793 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACDJ60_RS08435 (ACDJ60_08435) ompA 1770925..1771995 (-) 1071 WP_002898408.1 porin OmpA -
  ACDJ60_RS08440 (ACDJ60_08440) sulA 1772348..1772857 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACDJ60_RS08445 (ACDJ60_08445) sxy/tfoX 1773206..1773802 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ACDJ60_RS08450 (ACDJ60_08450) yccS 1773816..1775951 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACDJ60_RS08455 (ACDJ60_08455) - 1775969..1776415 (-) 447 WP_004224032.1 YccF domain-containing protein -
  ACDJ60_RS08460 (ACDJ60_08460) helD 1776540..1778594 (+) 2055 WP_004179218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=1041812 ACDJ60_RS08445 WP_004179217.1 1773206..1773802(+) (sxy/tfoX) [Klebsiella pneumoniae strain LA111]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1041812 ACDJ60_RS08445 WP_004179217.1 1773206..1773802(+) (sxy/tfoX) [Klebsiella pneumoniae strain LA111]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment