Detailed information NTG1041702

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KJP56_RS14325
• Genome accession: NZ_OX419652
• Coordinates: 2664299..2665426 (-)
• Length: 375 a.a.
• NCBI ID: WP_213419123.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6131
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2659299..2670426

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP56_RS14300	-	2659473..2659651 (-)	179	Protein_2772	hypothetical protein	-
KJP56_RS14305 (NRS6131_14255)	fumC	2659777..2661165 (-)	1389	WP_213419125.1	class II fumarate hydratase	-
KJP56_RS14310 (NRS6131_14260)	-	2661332..2662222 (+)	891	WP_213419124.1	LysR family transcriptional regulator	-
KJP56_RS14315 (NRS6131_14265)	-	2663164..2663559 (+)	396	WP_046160622.1	VOC family protein	-
KJP56_RS14325 (NRS6131_14275)	rapC	2664299..2665426 (-)	1128	WP_213419123.1	Rap family tetratricopeptide repeat protein	Regulator
KJP56_RS14330	phrE	2665834..2665968 (+)	135	WP_032725165.1	phosphatase RapE inhibitor PhrE	-
KJP56_RS14335 (NRS6131_14280)	-	2666103..2666954 (-)	852	WP_032725166.1	aldo/keto reductase	-
KJP56_RS14340 (NRS6131_14285)	-	2667125..2667568 (+)	444	WP_029318107.1	MerR family transcriptional regulator	-
KJP56_RS14345	-	2667769..2667918 (-)	150	WP_234398249.1	helix-turn-helix domain-containing protein	-
KJP56_RS14350 (NRS6131_14300)	-	2668501..2670323 (+)	1823	Protein_2781	T7SS effector LXG polymorphic toxin	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44122.25 Da
• Isoelectric Point: 5.6679

>NTDB_id=1041702 KJP56_RS14325 WP_213419123.1 2664299..2665426(-) (rapC) [Bacillus subtilis isolate NRS6131]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIDE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYDKSQPHLEKALELSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=1041702 KJP56_RS14325 WP_213419123.1 2664299..2665426(-) (rapC) [Bacillus subtilis isolate NRS6131]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTGGAGCAAGAGATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCCTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACAACACGTATAAGACCAACTATTGACGAA
CTTCTCGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGTCTGTTGTCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCATTGGATATTTATAATCAATATGAACTTTATAAGGTGCGGAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGATAAAAGTCAGCCGCATCTTGAAAAGGCATTAGAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGCTCTGCACTATATAATTTAGGCACTAACTTTGCTGACAGTGGTGATTACGAACAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (259-287)

• Tetratricopeptide repeat (TPR_12) (195-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.149	100	0.443
rapF	Bacillus subtilis subsp. subtilis str. 168	39.153	100	0.395