Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ACDZ81_RS13070 | Genome accession | NZ_CP168028 |
| Coordinates | 2638192..2639229 (-) | Length | 345 a.a. |
| NCBI ID | WP_053573197.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain CM5 isolate | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2633192..2644229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDZ81_RS13020 (ACDZ81_13020) | tasA | 2633426..2634211 (-) | 786 | WP_007408329.1 | biofilm matrix protein TasA | - |
| ACDZ81_RS13025 (ACDZ81_13025) | sipW | 2634276..2634860 (-) | 585 | WP_015240205.1 | signal peptidase I SipW | - |
| ACDZ81_RS13030 (ACDZ81_13030) | tapA | 2634832..2635503 (-) | 672 | WP_053573199.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACDZ81_RS13035 (ACDZ81_13035) | - | 2635762..2636091 (+) | 330 | WP_039254490.1 | DUF3889 domain-containing protein | - |
| ACDZ81_RS13040 (ACDZ81_13040) | - | 2636131..2636310 (-) | 180 | WP_003153093.1 | YqzE family protein | - |
| ACDZ81_RS13045 (ACDZ81_13045) | comGG | 2636367..2636744 (-) | 378 | WP_015417814.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACDZ81_RS13050 (ACDZ81_13050) | comGF | 2636745..2637245 (-) | 501 | WP_256052909.1 | competence type IV pilus minor pilin ComGF | - |
| ACDZ81_RS13055 (ACDZ81_13055) | comGE | 2637154..2637468 (-) | 315 | WP_012117982.1 | competence type IV pilus minor pilin ComGE | - |
| ACDZ81_RS13060 (ACDZ81_13060) | comGD | 2637452..2637889 (-) | 438 | WP_012117983.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACDZ81_RS13065 (ACDZ81_13065) | comGC | 2637879..2638187 (-) | 309 | WP_079979070.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACDZ81_RS13070 (ACDZ81_13070) | comGB | 2638192..2639229 (-) | 1038 | WP_053573197.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACDZ81_RS13075 (ACDZ81_13075) | comGA | 2639216..2640286 (-) | 1071 | WP_053573196.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACDZ81_RS13080 (ACDZ81_13080) | - | 2640479..2641429 (-) | 951 | WP_015417820.1 | magnesium transporter CorA family protein | - |
| ACDZ81_RS13085 (ACDZ81_13085) | - | 2641575..2642876 (+) | 1302 | WP_012117986.1 | hemolysin family protein | - |
| ACDZ81_RS13090 (ACDZ81_13090) | - | 2642914..2643744 (-) | 831 | WP_053573195.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39586.97 Da Isoelectric Point: 9.6788
>NTDB_id=1041635 ACDZ81_RS13070 WP_053573197.1 2638192..2639229(-) (comGB) [Bacillus velezensis strain CM5 isolate]
MKRIKRTWPLKDQAAFLKRLGGMTEKGYSLIEGLRLLQLQLHKRQLAELKEGIRRLREGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTNQIKKMLRYPMFLIFSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGLLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
MKRIKRTWPLKDQAAFLKRLGGMTEKGYSLIEGLRLLQLQLHKRQLAELKEGIRRLREGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTNQIKKMLRYPMFLIFSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGLLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1041635 ACDZ81_RS13070 WP_053573197.1 2638192..2639229(-) (comGB) [Bacillus velezensis strain CM5 isolate]
ATGAAGCGGATTAAACGAACATGGCCGTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGGAATGACGGAAAAAGG
ATACAGCCTGATTGAAGGGCTCAGACTGCTGCAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGAAGGAAGGAATCC
GCCGGCTGAGAGAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAGAAACACGGGGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTATTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATTTTTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACGTCCGGTGCGACTGCTTTCATCTTTGCATTTTTT
CGGCATTTTCATGAAGCCTGCGCACTGGCGCTTTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGATAAAATGCTGATTGTTGTGAAAATACCACTATTAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTTTCGATCTATGACAGCTTAACAGCTTTTAAAGAGCAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCTGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
ATGAAGCGGATTAAACGAACATGGCCGTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGGAATGACGGAAAAAGG
ATACAGCCTGATTGAAGGGCTCAGACTGCTGCAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGAAGGAAGGAATCC
GCCGGCTGAGAGAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAGAAACACGGGGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTATTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATTTTTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACGTCCGGTGCGACTGCTTTCATCTTTGCATTTTTT
CGGCATTTTCATGAAGCCTGCGCACTGGCGCTTTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGATAAAATGCTGATTGTTGTGAAAATACCACTATTAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGCCTTTCGATCTATGACAGCTTAACAGCTTTTAAAGAGCAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCTGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
65.635 |
93.623 |
0.614 |