Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ACDZ78_RS01990 | Genome accession | NZ_CP168026 |
| Coordinates | 428060..429208 (+) | Length | 382 a.a. |
| NCBI ID | WP_007410270.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain EM5 isolate | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 423060..434208
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDZ78_RS01970 (ACDZ78_01970) | - | 423457..424140 (-) | 684 | WP_053573733.1 | ABC transporter ATP-binding protein | - |
| ACDZ78_RS01975 (ACDZ78_01975) | - | 424155..425591 (-) | 1437 | WP_053573732.1 | ABC transporter permease | - |
| ACDZ78_RS01980 (ACDZ78_01980) | - | 425804..426487 (+) | 684 | WP_007410267.1 | response regulator transcription factor | - |
| ACDZ78_RS01985 (ACDZ78_01985) | - | 426474..427907 (+) | 1434 | WP_162782989.1 | HAMP domain-containing sensor histidine kinase | - |
| ACDZ78_RS01990 (ACDZ78_01990) | rapC | 428060..429208 (+) | 1149 | WP_007410270.1 | Rap family tetratricopeptide repeat protein | Regulator |
| ACDZ78_RS01995 (ACDZ78_01995) | phrC | 429192..429311 (+) | 120 | WP_003156334.1 | PhrC/PhrF family phosphatase-inhibitory pheromone | Regulator |
| ACDZ78_RS02000 (ACDZ78_02000) | - | 429460..429570 (-) | 111 | WP_369719092.1 | YjcZ family sporulation protein | - |
| ACDZ78_RS02005 (ACDZ78_02005) | - | 429650..431014 (-) | 1365 | WP_033575080.1 | aspartate kinase | - |
| ACDZ78_RS02010 (ACDZ78_02010) | ceuB | 431428..432381 (+) | 954 | WP_015239156.1 | ABC transporter permease | Machinery gene |
| ACDZ78_RS02015 (ACDZ78_02015) | - | 432371..433318 (+) | 948 | WP_014416905.1 | iron chelate uptake ABC transporter family permease subunit | - |
| ACDZ78_RS02020 (ACDZ78_02020) | - | 433312..434070 (+) | 759 | WP_053573731.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 45475.70 Da Isoelectric Point: 4.9916
>NTDB_id=1041445 ACDZ78_RS01990 WP_007410270.1 428060..429208(+) (rapC) [Bacillus velezensis strain EM5 isolate]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI
Nucleotide
Download Length: 1149 bp
>NTDB_id=1041445 ACDZ78_RS01990 WP_007410270.1 428060..429208(+) (rapC) [Bacillus velezensis strain EM5 isolate]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAGACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAGACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
82.461 |
100 |
0.825 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
57.105 |
99.476 |
0.568 |