Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACDH76_RS07240 | Genome accession | NZ_CP168000 |
| Coordinates | 1628830..1629363 (+) | Length | 177 a.a. |
| NCBI ID | WP_008572410.1 | Uniprot ID | - |
| Organism | Xanthomonas axonopodis pv. cassiae strain NCPPB 645 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1623830..1634363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDH76_RS07215 (ACDH76_07215) | - | 1625103..1625552 (-) | 450 | WP_372358228.1 | DUF2147 domain-containing protein | - |
| ACDH76_RS07220 (ACDH76_07220) | - | 1625642..1626205 (-) | 564 | WP_372358229.1 | hypothetical protein | - |
| ACDH76_RS07225 (ACDH76_07225) | - | 1626195..1626347 (-) | 153 | WP_338339650.1 | hypothetical protein | - |
| ACDH76_RS07230 (ACDH76_07230) | - | 1626551..1627351 (+) | 801 | WP_008572408.1 | dienelactone hydrolase family protein | - |
| ACDH76_RS07235 (ACDH76_07235) | - | 1627556..1628554 (-) | 999 | WP_008572409.1 | polyprenyl synthetase family protein | - |
| ACDH76_RS07240 (ACDH76_07240) | ssb | 1628830..1629363 (+) | 534 | WP_008572410.1 | single-stranded DNA-binding protein | Machinery gene |
| ACDH76_RS07245 (ACDH76_07245) | - | 1629649..1631133 (-) | 1485 | WP_372358230.1 | diguanylate cyclase domain-containing protein | - |
| ACDH76_RS07250 (ACDH76_07250) | - | 1631421..1632428 (+) | 1008 | WP_109291348.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| ACDH76_RS07255 (ACDH76_07255) | paoA | 1632857..1633507 (+) | 651 | WP_033478648.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
Sequence
Protein
Download Length: 177 a.a. Molecular weight: 18924.78 Da Isoelectric Point: 5.3095
>NTDB_id=1041065 ACDH76_RS07240 WP_008572410.1 1628830..1629363(+) (ssb) [Xanthomonas axonopodis pv. cassiae strain NCPPB 645]
MARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEG
ELRYDKYTGQDGVEKYSTDIVANEMQMLGGRGEGGGGGMGGDRPQRSAPRQQGGGGGQGGGYGGGGGGQDYAPRRQQPAQ
QQSAPPMDDFADDDIPF
MARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEG
ELRYDKYTGQDGVEKYSTDIVANEMQMLGGRGEGGGGGMGGDRPQRSAPRQQGGGGGQGGGYGGGGGGQDYAPRRQQPAQ
QQSAPPMDDFADDDIPF
Nucleotide
Download Length: 534 bp
>NTDB_id=1041065 ACDH76_RS07240 WP_008572410.1 1628830..1629363(+) (ssb) [Xanthomonas axonopodis pv. cassiae strain NCPPB 645]
ATGGCCCGCGGCATCAACAAAGTCATCCTCGTCGGCAACCTCGGCAACGATCCCGACACCAAGTACACCCAGGCCGGCAT
GGCAATCACGCGCGTGAGCCTGGCCACCACCAGCATGCGCAAGGACCGCGACGGCAATAACCAGGAACGCACCGAGTGGC
ACCGCGTGGTGTTTTTCGGAAAGCTGGGCGAAATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGGTCTACGTCGAAGGC
GAACTGCGCTACGACAAGTACACCGGCCAGGACGGCGTGGAAAAGTACAGCACCGACATCGTCGCCAACGAGATGCAGAT
GCTCGGCGGCCGTGGTGAAGGCGGCGGTGGCGGGATGGGCGGCGATCGCCCGCAGCGCTCGGCGCCGCGTCAGCAGGGCG
GCGGCGGTGGGCAGGGTGGTGGATACGGCGGCGGTGGCGGTGGTCAGGACTATGCGCCGCGCCGTCAGCAGCCGGCCCAG
CAGCAGTCGGCACCGCCGATGGACGATTTCGCAGACGACGATATCCCGTTCTGA
ATGGCCCGCGGCATCAACAAAGTCATCCTCGTCGGCAACCTCGGCAACGATCCCGACACCAAGTACACCCAGGCCGGCAT
GGCAATCACGCGCGTGAGCCTGGCCACCACCAGCATGCGCAAGGACCGCGACGGCAATAACCAGGAACGCACCGAGTGGC
ACCGCGTGGTGTTTTTCGGAAAGCTGGGCGAAATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGGTCTACGTCGAAGGC
GAACTGCGCTACGACAAGTACACCGGCCAGGACGGCGTGGAAAAGTACAGCACCGACATCGTCGCCAACGAGATGCAGAT
GCTCGGCGGCCGTGGTGAAGGCGGCGGTGGCGGGATGGGCGGCGATCGCCCGCAGCGCTCGGCGCCGCGTCAGCAGGGCG
GCGGCGGTGGGCAGGGTGGTGGATACGGCGGCGGTGGCGGTGGTCAGGACTATGCGCCGCGCCGTCAGCAGCCGGCCCAG
CAGCAGTCGGCACCGCCGATGGACGATTTCGCAGACGACGATATCCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
44.615 |
100 |
0.492 |
| ssb | Glaesserella parasuis strain SC1401 |
45.405 |
100 |
0.475 |
| ssb | Neisseria meningitidis MC58 |
42.473 |
100 |
0.446 |
| ssb | Neisseria gonorrhoeae MS11 |
42.473 |
100 |
0.446 |