Detailed information NTG1041005

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KJP47_RS01700
• Genome accession: NZ_OX419577
• Coordinates: 312496..313617 (+)
• Length: 373 a.a.
• NCBI ID: WP_041352230.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6120
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 307496..318617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP47_RS01675 (NRS6120_01760)	ycdA	307501..308565 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
KJP47_RS01680	-	308588..308719 (-)	132	WP_003246334.1	hypothetical protein	-
KJP47_RS01685 (NRS6120_01765)	ycdB	308893..310314 (+)	1422	WP_121549293.1	YcdB/YcdC domain-containing protein	-
KJP47_RS01690 (NRS6120_01770)	ycdC	310501..311862 (+)	1362	WP_213382841.1	YcdB/YcdC domain-containing protein	-
KJP47_RS01695 (NRS6120_01775)	cwlK	311870..312373 (-)	504	WP_213382839.1	M15 family metallopeptidase	-
KJP47_RS01700 (NRS6120_01780)	rapF	312496..313617 (+)	1122	WP_041352230.1	response regulator aspartate phosphatase RapJ	Regulator
KJP47_RS01705 (NRS6120_01785)	ycdF	313725..314501 (+)	777	WP_213382837.1	SDR family oxidoreductase	-
KJP47_RS01710	ycdG	314526..316209 (+)	1684	Protein_293	alpha-glucosidase	-
KJP47_RS01715 (NRS6120_01810)	znuA	316397..317356 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
KJP47_RS01720 (NRS6120_01815)	znuC	317411..318106 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44372.23 Da
• Isoelectric Point: 4.8344

>NTDB_id=1041005 KJP47_RS01700 WP_041352230.1 312496..313617(+) (rapF) [Bacillus subtilis isolate NRS6120]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAAEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=1041005 KJP47_RS01700 WP_041352230.1 312496..313617(+) (rapF) [Bacillus subtilis isolate NRS6120]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAGCTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGACTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGCAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (219-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405