Detailed information NTG1040544

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KJP57_RS02035
• Genome accession: NZ_OX419573
• Coordinates: 352982..354103 (+)
• Length: 373 a.a.
• NCBI ID: WP_212082703.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6085
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 347982..359103

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP57_RS02010 (NRS6085_02035)	ycdA	347987..349051 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
KJP57_RS02015	-	349074..349205 (-)	132	WP_003246334.1	hypothetical protein	-
KJP57_RS02020 (NRS6085_02040)	ycdB	349379..350800 (+)	1422	WP_213407931.1	YcdB/YcdC domain-containing protein	-
KJP57_RS02025 (NRS6085_02045)	ycdC	350987..352348 (+)	1362	WP_213407930.1	YcdB/YcdC domain-containing protein	-
KJP57_RS02030 (NRS6085_02050)	cwlK	352356..352859 (-)	504	WP_116316151.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
KJP57_RS02035 (NRS6085_02055)	rapF	352982..354103 (+)	1122	WP_212082703.1	tetratricopeptide repeat protein	Regulator
KJP57_RS02040 (NRS6085_02060)	ycdF	354211..354987 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
KJP57_RS02045 (NRS6085_02065)	ycdG	355011..356696 (+)	1686	WP_213407929.1	alpha-glucosidase	-
KJP57_RS02050 (NRS6085_02070)	znuA	356884..357843 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
KJP57_RS02055 (NRS6085_02075)	znuC	357898..358593 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44430.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=1040544 KJP57_RS02035 WP_212082703.1 352982..354103(+) (rapF) [Bacillus subtilis isolate NRS6085]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSSDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=1040544 KJP57_RS02035 WP_212082703.1 352982..354103(+) (rapF) [Bacillus subtilis isolate NRS6085]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAGAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACTGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGACAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGAATAAAAAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGGAGCAGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405