Detailed information NTG1040541

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KJP57_RS01320
• Genome accession: NZ_OX419573
• Coordinates: 216401..217534 (+)
• Length: 377 a.a.
• NCBI ID: WP_213408412.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6085
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 211401..222534

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP57_RS01290 (NRS6085_01300)	-	211535..211957 (+)	423	WP_213408418.1	phage holin family protein	-
KJP57_RS01295 (NRS6085_01305)	-	212005..212973 (+)	969	WP_213408416.1	N-acetylmuramoyl-L-alanine amidase	-
KJP57_RS01300 (NRS6085_01310)	-	213019..213534 (-)	516	WP_202658096.1	hypothetical protein	-
KJP57_RS01305 (NRS6085_01315)	-	213662..213862 (-)	201	WP_250629547.1	hypothetical protein	-
KJP57_RS01310 (NRS6085_01320)	-	214194..214409 (-)	216	WP_237729014.1	hypothetical protein	-
KJP57_RS01315 (NRS6085_01325)	-	214476..216191 (-)	1716	WP_213408414.1	T7SS effector LXG polymorphic toxin	-
KJP57_RS01320 (NRS6085_01330)	rapC	216401..217534 (+)	1134	WP_213408412.1	tetratricopeptide repeat protein	Regulator
KJP57_RS01325 (NRS6085_01335)	-	217524..217688 (+)	165	WP_213408410.1	hypothetical protein	-
KJP57_RS01330 (NRS6085_01340)	-	217720..218052 (-)	333	WP_213408408.1	YolD-like family protein	-
KJP57_RS01335 (NRS6085_01345)	-	218159..218386 (+)	228	WP_213408406.1	hypothetical protein	-
KJP57_RS01340 (NRS6085_01350)	-	218379..218591 (+)	213	WP_186453298.1	transcriptional regulator	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 44527.91 Da
• Isoelectric Point: 5.5902

>NTDB_id=1040541 KJP57_RS01320 WP_213408412.1 216401..217534(+) (rapC) [Bacillus subtilis isolate NRS6085]
MNPVLPSSHVGVKITEWYKMIRQFSVPDAEILKAEVEREIKQMEEDEYLLIYYSLMSFRHQLMLDYLEPEKKYRTARPTI
SELLEKIEAPQKKLTGLLKYYSLFFRGMYEFDQQEFVEAINYYRKAEKELYAVTDEIEQAEFHFKVAEAYYNMKQTHVSM
HHILKALEIYDQNPLYTVRKIQSLFVIVGNYLDFKHYEKGLKHLEEALKLSKELGHDRLISSALYNLGECYHYMGQPSKA
EGYLKEAAVVAEKANLRTLPHTLHSLATVLFKQEKFNEGQKVLQQGIETAQKFNDELFLSMNQFLNALYIESVDKQGILN
ILNHLNESHMFSFTEHITLLTAEYYREGGEFEESSFFYDKMVEAQLQIQRGDCLYEY

Nucleotide

• Length: 1134 bp

>NTDB_id=1040541 KJP57_RS01320 WP_213408412.1 216401..217534(+) (rapC) [Bacillus subtilis isolate NRS6085]
GTGAATCCGGTTTTACCTTCCTCTCATGTAGGGGTTAAGATTACCGAATGGTATAAGATGATACGTCAGTTTAGTGTTCC
GGATGCTGAAATTTTAAAAGCAGAAGTTGAAAGAGAAATTAAACAGATGGAAGAGGATGAGTATTTACTAATCTATTATT
CACTCATGAGCTTTCGACACCAACTTATGCTCGACTACTTAGAGCCAGAAAAAAAGTATAGAACAGCACGCCCAACCATC
TCAGAATTACTTGAAAAAATTGAAGCTCCCCAAAAGAAATTAACCGGTCTCCTTAAATATTACTCACTATTTTTCCGTGG
TATGTATGAATTTGACCAGCAAGAATTCGTGGAAGCTATAAACTATTACCGTAAAGCTGAAAAAGAACTTTATGCTGTTA
CTGATGAAATCGAACAAGCTGAATTTCATTTTAAAGTAGCAGAAGCTTATTACAACATGAAACAAACCCACGTTTCCATG
CATCACATTTTAAAGGCATTAGAGATTTATGATCAGAATCCGCTGTATACTGTAAGGAAAATTCAAAGCTTGTTTGTAAT
CGTAGGGAACTATCTCGATTTTAAACATTATGAAAAAGGGTTAAAACATCTTGAAGAAGCCCTGAAGCTTTCTAAGGAAT
TAGGGCACGACAGACTAATAAGTTCTGCTCTTTATAATTTAGGCGAATGTTATCATTACATGGGACAACCAAGTAAAGCC
GAGGGATATTTGAAAGAAGCTGCTGTGGTTGCAGAAAAAGCCAACTTAAGGACGCTTCCCCATACGCTTCATTCGTTGGC
CACAGTTTTGTTCAAGCAAGAAAAGTTTAATGAAGGACAGAAGGTTTTGCAGCAAGGGATTGAAACAGCGCAAAAATTTA
ATGATGAACTTTTCCTATCGATGAATCAGTTTCTGAATGCCTTATATATTGAGTCTGTTGATAAACAGGGGATTCTCAAT
ATATTGAATCATCTTAATGAAAGTCACATGTTCTCATTTACGGAACACATAACGTTGCTAACTGCAGAATATTATAGAGA
AGGCGGAGAATTTGAGGAATCCAGTTTTTTCTATGATAAAATGGTTGAAGCACAGCTTCAAATCCAGCGAGGTGACTGTT
TATATGAGTATTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (197-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	43.467	99.469	0.432
rapF	Bacillus subtilis subsp. subtilis str. 168	40.212	100	0.403