Detailed information NTG0104044

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QUE60_RS08440
• Genome accession: NZ_AP028142
• Coordinates: 1674598..1675503 (+)
• Length: 301 a.a.
• NCBI ID: WP_286226741.1
• Uniprot ID: -
• Organism: Polynucleobacter sp. HIN11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1669598..1680503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE60_RS08410 (PHIN11_16290)	pth	1669763..1670353 (+)	591	WP_286223593.1	aminoacyl-tRNA hydrolase	-
QUE60_RS08415 (PHIN11_16300)	-	1670359..1670619 (-)	261	WP_286223594.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QUE60_RS08420 (PHIN11_16310)	coaD	1670652..1671143 (-)	492	WP_286223595.1	pantetheine-phosphate adenylyltransferase	-
QUE60_RS08425 (PHIN11_16320)	rsmD	1671178..1671768 (-)	591	WP_286226738.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QUE60_RS08430 (PHIN11_16330)	-	1671769..1673109 (-)	1341	WP_286226739.1	pitrilysin family protein	-
QUE60_RS08435 (PHIN11_16340)	-	1673121..1674539 (-)	1419	WP_286226740.1	pitrilysin family protein	-
QUE60_RS08440 (PHIN11_16350)	pilA	1674598..1675503 (+)	906	WP_286226741.1	signal recognition particle-docking protein FtsY	Machinery gene
QUE60_RS08445 (PHIN11_16360)	rpoH	1675621..1676526 (+)	906	WP_353506037.1	RNA polymerase sigma factor RpoH	-
QUE60_RS08450 (PHIN11_16370)	-	1676530..1677102 (-)	573	WP_286223600.1	SCO family protein	-
QUE60_RS08455 (PHIN11_16380)	cyoE	1677106..1677990 (-)	885	WP_286223601.1	heme o synthase	-
QUE60_RS08460 (PHIN11_16390)	-	1677987..1679111 (-)	1125	WP_286226742.1	COX15/CtaA family protein	-
QUE60_RS08465 (PHIN11_16400)	-	1679108..1679761 (-)	654	WP_286223603.1	hypothetical protein	-
QUE60_RS08470 (PHIN11_16410)	-	1679775..1680491 (-)	717	WP_286226743.1	SURF1 family protein	-

Sequence

Protein

• Length: 301 a.a.
• Molecular weight: 32336.89 Da
• Isoelectric Point: 6.9754

>NTDB_id=104044 QUE60_RS08440 WP_286226741.1 1674598..1675503(+) (pilA) [Polynucleobacter sp. HIN11]
MFGLRKTLSSLFTRNRVDEAWFDHLEELLIKADVGVSTSTALIASLRKSAKQHSITNSEDLKAVLVDELSHLLSDLESPE
NPLSPSATHPKPEVWLIVGVNGAGKTTSIGKLCHHFQAQGKSVLLAAGDTFRAAARNQLKEWGERNQVQVLSQESGDAGA
IAHDAIQAALSRQVDVVLIDTAGRLATQANLMEELKKVKRVISKLIPDAPHQIVLVLDGNTGQNGIAQVLAFRNAIGLHG
LIVTKLDGTAKGGVICALRNELQSSSQTQGPKTYVYALGKGEQLGDLELFSAKAYAQELVE

Nucleotide

• Length: 906 bp

>NTDB_id=104044 QUE60_RS08440 WP_286226741.1 1674598..1675503(+) (pilA) [Polynucleobacter sp. HIN11]
ATGTTTGGTTTACGTAAAACACTTAGCTCACTCTTTACTCGTAACCGAGTGGATGAAGCCTGGTTCGATCATTTAGAAGA
ATTACTGATCAAAGCCGATGTTGGTGTTTCGACATCAACCGCTCTAATAGCTAGTCTACGCAAATCGGCCAAACAGCATT
CCATTACAAATTCTGAGGATTTAAAGGCAGTTCTAGTTGATGAGCTCAGCCATCTTTTGAGTGACTTAGAGTCCCCAGAA
AATCCTTTAAGCCCAAGTGCTACGCATCCTAAGCCAGAAGTTTGGCTAATTGTAGGGGTCAATGGTGCTGGCAAAACCAC
ATCGATTGGAAAACTATGTCATCACTTCCAGGCTCAAGGAAAGTCGGTGCTCCTCGCTGCTGGGGATACATTTCGAGCGG
CGGCGCGCAATCAACTCAAGGAATGGGGTGAGCGCAATCAAGTGCAAGTGCTCAGCCAAGAGAGTGGCGATGCTGGCGCG
ATTGCGCATGATGCAATCCAAGCCGCTTTGTCTCGGCAGGTTGACGTTGTACTAATTGATACGGCTGGCCGACTCGCTAC
TCAAGCGAATCTGATGGAGGAATTAAAGAAGGTCAAGCGAGTCATTTCCAAGTTGATCCCCGATGCCCCCCATCAAATTG
TCTTGGTCCTTGATGGCAATACGGGTCAGAATGGAATTGCCCAAGTTTTGGCTTTTCGGAACGCAATTGGACTACACGGC
CTTATCGTCACCAAATTGGATGGCACCGCTAAAGGCGGGGTAATTTGCGCACTTCGCAATGAGTTGCAAAGCTCCTCCCA
AACCCAGGGCCCAAAAACCTATGTTTATGCACTTGGCAAGGGTGAGCAATTAGGTGATTTGGAGCTATTTTCTGCTAAGG
CTTATGCCCAAGAGCTTGTAGAATAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (3-69)

• SRP54-type protein, GTPase domain (SRP54) (92-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.993	99.003	0.485